FastQCFastQC Report
Sun 21 May 2023
EGAF00007832752

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832752
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68331
Sequences flagged as poor quality0
Sequence length235-238
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2648738.76278702199587No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1013914.838067641334094No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA34114.991877771436098No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG23843.488899620962667No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC19872.907904172337592No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA17852.6122843219036747No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAGGTCA17542.5669169191143113No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT16592.4278877815340034No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG7571.1078427068241354No Hit
GCTGCGTTCTTCATCGATGCGAATAACTACGACGAAGAGGGCAAGGTTAC6060.8868595513017518No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC5220.7639285243886377No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT5060.7405130906909017No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC4970.7273419092359251No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG4960.7258784446298165No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4680.6849014356587786No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC4240.6205089929900045No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA3330.48733371383413093No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3120.45660095710585236No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3080.4507470986814184No Hit
GCTGCGTTCTTCATCGATGCCTGCAACAGCGCGGCTAGTTTCATTACCAC2890.42294127116535685No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2820.4126970189225973No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT2670.3907450498309698No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG2170.31757181952554475No Hit
GCTGCGTTCTTCATCGATGGTTCAGGTCCGGTATTCTCCGGTGCATTGTT2160.3161083549194363No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT2110.30879103188889373No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG2060.30147370885835123No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT1800.2634236290995302No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1700.2487889830384452No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1660.2429351246140112No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT1630.23854473079568572No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1610.23561780158346868No Hit
GCTGCGTTCTTCATCGATGCGAGAACCACGAGATCCGTTGTTGAAAGTTT1530.22391008473460072No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1490.2180562263101667No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA1390.20342158024908166No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT1390.20342158024908166No Hit
GCTGCGTTCTTCATCGATGCCCAGCGTGAGCTGCATGATGACGAGCTTCT1360.19903118643075615No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1240.18146961115745414No Hit
GCTGCGTTCTTCATCGATGATCGCAACTTCGGCGGGCTTCCCGACTGGGG1210.17707921733912865No Hit
GCTGCGTTCTTCATCGATGCGGATTATCGGGGAGAAATCGGCGTAATCTT1160.16976189430858615No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG1160.16976189430858615No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA1120.16390803588415215No Hit
GCTGCGTTCTTCATCGATACCGGTCGCTTTGGAAACCGCCGTGCGGACAT1110.16244457127804365No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG1060.15512724824750113No Hit
GCTGCGTTCTTCATCGATGCGCGATGCCTTAAGTCTGCTTGACCAAGCCA1050.15366378364139263No Hit
GCTGCGTTCTTCATCGATGCCCGCCGTGTTCGGTAGCGGGATCGCAAACT1030.15073685442917562No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA1030.15073685442917562No Hit
GCTGCGTTCTTCATCGATGCCATAAAGCGCCTTTCGGGACGGGTTCCGAT1030.15073685442917562No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1010.14780992521695863No Hit
GCTGCGTTCTTCATCGATGCTGGGGCTGGCATTGATAGATTTGGCTACAG970.14195606679252462No Hit
GCTGCGTTCTTCATCGATGCAATATCGGCTTGTGCTGTCTTAAACGCAGC960.14049260218641613No Hit
GCTGCGTTCTTCATCGATGCCCCATGACAAGAAAGGTAAAGCCATCTTTG940.13756567297419914No Hit
GCTGCGTTCTTCATCGATGCTATCTTGAACCACTCAATCGATGCTGCCCC880.12878488533754812No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT870.1273214207314396No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG850.1243944915192226No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA830.1214675623070056No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT820.1200040977008971No Hit
GCTGCGTTCTTCATCGATGCACACAGTGGTGCCCGCCTGCTCGTTCCTCT810.1185406330947886No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTT790.11561370388257161No Hit
GCTGCGTTCTTCATCGATGTCAGATGCCTTGGCATCCTTCGTATGCCCTT780.11415023927646309No Hit
GCTGCGTTCTTCATCGATGCGAGATCCGAGATATCCGTTGCCGAGAGTCG760.1112233100642461No Hit
GCTGCGTTCTTCATCGATGCGCTGGAACTGCTCGATGGTGACCGCGTCGA750.1097598454581376No Hit
GCTGCGTTCTTCATCGATGCCTTCCTTAACGTGGACAAAGGATTGGTCAA730.10683291624592059No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG720.10536945163981208No Hit
GCTGCGTTCTTCATCGATGCTTGCCAGCGTATGTGGGTCTATCACGTCCG720.10536945163981208No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT710.10390598703370359No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAACACTGTAATGTCTTC690.1009790578214866No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)