FastQCFastQC Report
Sun 21 May 2023
EGAF00007832759

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832759
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104412
Sequences flagged as poor quality0
Sequence length247-250
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC4437342.49798873692679No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG2456023.522200513350956No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG57775.532888939968586No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA42154.036892311228595No Hit
GGAAGTAAAAGTCGTAACAAGGATAGCAGAGGCATCGATGAAGAACGCAG31813.046584683752825No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC29042.781289506953224No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG10811.0353216105428493No Hit
GGAAGTAAAAGTCGTAACAAGTCCGTAGTGGTGGCGCATGACGTGGAAGC10380.9941386047580738No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC9510.9108148488679462No Hit
GGAAGTAAAAGTCGTAACAAGGAATCATCATGCAGTGAGGAAGGATCATG9110.872505076044899No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGGAGGAGGTGCCAGGAATTTG8560.8198291384132093No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC7530.7211814733938628No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG6320.6052944106041451No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGATAGTCCTGAAGTATCTCTTCA4450.4261962226563996No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG4030.3859709611922001No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA3870.37064705206298126No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC3490.3342527678810865No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT3240.31030915986668195No Hit
GGAAGTAAAAGTCGTAACAAGGATAGCAGAGCATCGATGAAGAACGCAGC2710.2595487108761445No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC2680.256675477914416No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCGAT2640.2528445006321113No Hit
GGAAGTAAAAGTCGTAACAAGGCAAAAATAGACAAGTGGGACTATATCAA2600.2490135233498065No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC2150.20591502892387847No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC2050.19633758571811671No Hit
GGAAGTAAAAGTCGTAACAAGGATAGCAGAGGATGAAGAACGCAGCCAGG1970.18867563115350725No Hit
GGAAGTAAAAGTCGTAACAAGGATAGCAGAGGAAGAACGCAGCCAGGATA1760.1685630004214075No Hit
GGAAGTAAAAGTCGTAACAAGGACGCACATCATGATGCTCAGGAAGCTGG1600.15323909129218863No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1600.15323909129218863No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC1590.15228134697161244No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT1500.14366164808642684No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT1390.1331264605600889No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC1390.1331264605600889No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCTGAAGGATC1320.12642225031605564No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC1270.12163352871317472No Hit
GGAAGTAAAAGTCGTAACAAGGACACTTGGGACCGTAAGGATACCCGCAC1210.11588706278971765No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT1200.11492931846914148No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGATAATGAAGAAACAAAGGTTGGT1120.10726736390453205No Hit
GGAAGTAAAAGTCGTAACAAACAGGGAGTTGTGGTGGGAAGGAGCTTGCA1090.10439413094280352No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC1080.10343638662222733No Hit
GGAAGTAAAAGTCGTAACAAGGATAGCATCGATGAAGAACGCAGCCAGGA1060.10152089798107497No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)