FastQCFastQC Report
Sun 21 May 2023
EGAF00007832771

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832771
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences214423
Sequences flagged as poor quality0
Sequence length247-250
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC6327329.508494890939872No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA3508916.364382552244862No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG2853913.309672936205539No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC2430211.333672227326359No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG74563.477238915601405No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC50042.3337048730779815No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC38531.7969154428396208No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG33421.5586014560005224No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC31101.4504041077682897No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCTTACGTGCA30321.4140274131040047No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC26121.2181529033732388No Hit
GGAAGTAAAAGTCGTAACAAGGTACCCCTACGAGAACGTGGGGGTGGATC23411.0917672078088638No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC17210.8026191220158286No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC15570.7261347896447676No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGGAGGAGGTGCCAGGAATTTG12700.5922872079954109No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC12680.5913544722347883No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC9290.43325576080924155No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA8150.380089822453748No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA7800.3637669466428508No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG7710.3595696357200487No Hit
GGAAGTAAAAGTCGTAACAAGGGGCTGAGCGAGAGCATGGACACGGTCAC7620.35537232479724656No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC7000.32645751621794306No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT6410.2989418112795736No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGATAATGAAGAAACAAAGGTTGGT5730.26722879541840194No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC5710.26629605965777925No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC5220.24344403352252325No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGTGGCATAGATGGTGATAACTTGTA5190.2420449298815892No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATC5060.23598214743754167No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG4900.2285202613525601No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT4540.2117310176613516No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTAGGATAAAGCA3860.18001800180018002No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTTCGGAAGGATC3480.16229602234834883No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACGTGCGGAAGGATC3470.1618296544680375No Hit
GGAAGTAAAAGTCGTAACAAAGTTTTGGTAGGTGAACCTGTGGAGGGATC3230.15063682534056513No Hit
GGAAGTAAAAGTCGTAACAAGGGGTAAGCTGAGGGGATGCGTTGGCATCG2990.1394439962130928No Hit
GGAAGTAAAAGTCGTAACAAGGGGTGGGCTATCTGAAGCCGGCTGCTACG2690.1254529598037524No Hit
GGAAGTAAAAGTCGTAACAAGGGCAGAAGGAATTCAGAAGAGCCAGGGTG2570.11985654524001622No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACTGAATCCGAAAAGAGCACA2520.1175247058384595No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGATAGTCCTGAAGTATCTCTTCA2500.1165919700778368No Hit
GGAAGTAAAAGTCGTAACAAGGCAAAAATAGACAAGTGGGACTATATCAA2470.11519286643690277No Hit
GGAAGTAAAAGTCGTAACAAGGTGACTGTTGAGTGAATTTCTTATACAAA2370.11052918763378929No Hit
GGAAGTAAAAGTCGTAACAAGGTCCTGTGAGAGAAGGACAGAACTGAGGT2280.10633187671098716No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC2280.10633187671098716No Hit
GGAAGTAAAAGTCGTAACAAGGGCTCTAATTAGACTCAGATGAAGAACGC2240.10446640518974176No Hit
GGAAGTAAAAGTCGTAACAAGGACGAGGTGGACATCCGCGTGGCGATCAG2160.100735462147251No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)