FastQCFastQC Report
Sun 21 May 2023
EGAF00007832779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72436
Sequences flagged as poor quality0
Sequence length247-250
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA1280417.67629355569054No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1231116.995692749461593No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC1012313.975095256502293No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC62518.629686896018555No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC31934.4080291567728755No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC30344.1885250427964No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC26483.6556408415704897No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC23783.282898006516097No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG22573.1158539952509803No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC13891.9175548070020432No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA12791.7656966149428461No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT10671.4730244629742117No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG9011.2438566458666962No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAAAGGACCGGAATCTGCTTCATACG5490.7579104312772654No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC4410.6088132972555083No Hit
GGAAGTAAAAGTCGTAACAAGGTATTCGAGGCGAGCGAGGTCAAGACGGA3910.5397868463195096No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA3310.4569551051963112No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3210.4431498150091115No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC1900.26230051355679496No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC1830.25263681042575514No Hit
GGAAGTAAAAGTCGTAACAAGGGCCATGTCGGTGGCGTTTTTGCCTTTGG1820.25125628140703515No Hit
GGAAGTAAAAGTCGTAACAAGGTGCGAGACCTCGAAGACCTGATGGAAAA1790.24711469435087524No Hit
GGAAGTAAAAGTCGTAACAAGGCAACGACGAGCACGATGCCGAGGATTTT1550.2139819979015959No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT1500.20707935280799605No Hit
GGAAGTAAAAGTCGTAACAAGCCAAAACCTGTTACATCAGTCATCGCTTT1480.20431829477055607No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA1430.1974156496769562No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCCGGGCACATGCACATAGAAACA1390.1918935336020763No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC1320.1822298304710365No Hit
GGAAGTAAAAGTCGTAACAAGGTGCAGCAATGTTATAACCGCGATTGGAT1310.18084930145231654No Hit
GGAAGTAAAAGTCGTAACAAGGTAAGAAAGGTAATTGGAATCAATACTTA1250.17256612733999668No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG980.13529184383455742No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT970.13391131481583743No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT920.12700866972223757No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGCTGGATC910.12562814070351758No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA900.12424761168479762No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACATCTCCGGCA890.12286708266607764No Hit
GGAAGTAAAAGTCGTAACAAGGCAATGAAACAAGCATACAACAAAAAATG870.1201060246286377No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA860.11872549560991773No Hit
GGAAGTAAAAGTCGTAACAAGGGCGATGTGAAGACCGGATGCAATGCCAG860.11872549560991773No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTAAATGAGGCTTTTGCCGAGTTTAA790.10906179247887791No Hit
GGAAGTAAAAGTCGTAACAATACGGATATTATGGGGATTCCCCTTCGATC780.10768126346015792No Hit
GGAAGTAAAAGTCGTAACAAGGCTATAGGTACCGACCTAACCGTTGATGA780.10768126346015792No Hit
GGAAGTAAAAGTCGTAACAAGGACGGCATTATTGGTTACGTTCTTGCTAT770.10630073444143795No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA740.10215914738527804No Hit
GGAAGTAAAAGTCGTAACAAGGGGAAGAAGGCATCGCTCGCCAGTACGGC740.10215914738527804No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)