FastQCFastQC Report
Sun 21 May 2023
EGAF00007832780

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832780
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72436
Sequences flagged as poor quality0
Sequence length237-238
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1230216.983267988293115No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1000313.809431774255895No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT974013.446352642332544No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT60578.36186426638688No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT31744.381799105417196No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA25993.587994919653211No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG22983.172455685018499No Hit
GCTGCGTTCTTCATCGATGCTCCATGTTATATGGATTTCATAACTAATAC22153.0578717764647414No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT12661.7477497376994864No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCGATG12421.7146170412502069No Hit
GCTGCGTTCTTCATCGATGCCCTAACCTGGAAGCTGCGTTCTTCATCGAT12091.669059583632448No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA11311.56137832017229No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT10491.4481749406372524No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG9701.3391131481583742No Hit
GCTGCGTTCTTCATCGATGCCCGGCTTCCTTTTTCTCTTTATCGAAAAAA9021.245237174885416No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT8821.2176265945110165No Hit
GCTGCGTTCTTCATCGATGCGGATTATCGAGGAGAAATCGGCGTAATCTT5450.7523883152023856No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4590.6336628195924678No Hit
GCTGCGTTCTTCATCGATGCTCAATTTCTGTGGAATGCCCACGCCATCTC4010.5535921365067094No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA3470.47904356949583077No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCGGCT3320.4583356342150312No Hit
GCTGCGTTCTTCATCGATGCCCTAACCTGGAAGCTGCGTTCTTCATCGGC3250.4486719310839914No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT3230.4459108730465514No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3170.4376276989342316No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2530.3492738417361533No Hit
GCTGCGTTCTTCATCGATGCCGACAACGCCCCTGCCGACATCATCGACCG1940.26782262963167486No Hit
GCTGCGTTCTTCATCGATGCCCTCTATCAGACGAATGGTAAAGGGGATAT1780.24573416533215528No Hit
GCTGCGTTCTTCATCGATGACAGTCTCGACTATCTCGAGCGAATCGACGA1680.23192887514495555No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC1500.20707935280799605No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGTCAAACT1480.20431829477055607No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACTGTGATGTCTTC1350.18637141752719644No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1330.1836103594897565No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1310.18084930145231654No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC1270.17532718537743663No Hit
GCTGCGTTCTTCATCGATGCTGCCAGACAAATATGCTCTGTGGCAATGGC1260.17394665635871664No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG1240.1711855983212767No Hit
GCTGCGTTCTTCATCGATGCAATAAGATGCCCACCATGGTCAGTTGGCAG1210.16704401126511678No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1120.15461925009663702No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC1010.13943343089071733No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA1000.13805290187199734No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACTATCGGGCAAACT970.13391131481583743No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC970.13391131481583743No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT970.13391131481583743No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT950.13115025677839748No Hit
GCTGCGTTCTTCATCGATGCTATTGTCTACGGTGTCTGCCATCCAAAATA890.12286708266607764No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT880.12148655364735766No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG830.1145839085537578No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT820.11320337953503781No Hit
GCTGCGTTCTTCATCGATGCAGAGCATACCGTTGTCACCGTTCCTCCGGC810.11182285051631786No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA800.11044232149759789No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAGTCCACTGTTGCCG800.11044232149759789No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA780.10768126346015792No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT780.10768126346015792No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAATTTG750.10353967640399803No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)