FastQCFastQC Report
Sun 21 May 2023
EGAF00007832808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65459
Sequences flagged as poor quality0
Sequence length235-238
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1188818.16098626621244No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1150817.580470217999054No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCATCGAT697510.6555248323378No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG692210.574558120350144No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT49237.520738171985518No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT43836.695794313998076No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT32704.995493362257291No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCATCGGC19372.9591041720771782No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT17032.6016285002826196No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG7891.2053346369483189No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA6921.0571502772727968No Hit
GCTGCGTTCTTCATCGATGAGATTCGGTTACGCTGCGTTCTTCATCGATG6260.9563238057409982No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCATCCTT5290.8081394460654762No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT4700.7180066912112926No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT3130.4781619028704991No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2790.426220993293512No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT2500.3819184527719641No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2340.3574756717945584No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC2210.33761591225041626No Hit
GCTGCGTTCTTCATCGATGCGATTCGGTTACGCTGCGTTCTTCATCGATG2180.3330328908171527No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1940.29636871935104414No Hit
GCTGCGTTCTTCATCGATGAGATTCGGTTACGCTGCGTTCTTCATCGGCT1920.29331337172886845No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1840.2810919812401656No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1710.26123222169602345No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1620.24748315739623275No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1290.1970699216303335No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1220.1863762049527185No Hit
GCTGCGTTCTTCATCGATGCGGTACCGACTTCGAAGACTTGCAGGATGGC1040.15887807635313708No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC970.14818435967552207No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT970.14818435967552207No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA950.14512901205334636No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCTTCCTT940.1436013382422585No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA890.13596296918681922No Hit
GCTGCGTTCTTCATCGATGCTTCATCATAGTCGCCATAACCATGAAGGCT840.12832460013137995No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG820.12526925250920423No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT800.12221390488702852No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC750.11457553583158923No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA710.10846484058723782No Hit
GCTGCGTTCTTCATCGATGCAGGTGATGAGGCCAGGGAGACCGCCGAACT690.10540949296506211No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)