FastQCFastQC Report
Sun 21 May 2023
EGAF00007832809

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832809
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73546
Sequences flagged as poor quality0
Sequence length247-250
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC2598435.330269491202785No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA1872525.460256166208907No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC1000013.596932532020775No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG23653.2156745438229133No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG17112.326435156228755No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC16912.299241291164713No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC11341.541892149131156No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC6920.9409077312158377No Hit
GGAAGTAAAAGTCGTAACAAGGTATCGAAGGTTTGGTACACGTTTCCGAA6730.9150735594049983No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT6660.9055557066325838No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA6150.8362113507192777No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC3300.44869877355668564No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC2780.37799472439017756No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA2630.3575993255921464No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT2290.3113697549832758No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT2190.29777282245125497No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGTAAGGATC2170.29505343594485084No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC2120.28825496967884046No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATC2030.27601773040002175No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGTGGCTGGAAC2000.2719386506404155No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC1680.22842846653794904No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG1600.2175509205123324No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGCTGGGGAAACGTTCACTTTAAAAG1330.18083920267587633No Hit
GGAAGTAAAAGTCGTAACAAGGTAGGAGAAGAAGAGCCCAGGTGAGGCAA1260.1713213499034618No Hit
GGAAGTAAAAGTCGTAACAAGGGCACGCTGAAAACTGCGCATCCGGCTAT1040.14140809833301607No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTTCGGAAGGATC990.13460963206700569No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCGAGCGTCATCTACGATCCGCGCCT930.1264514725477932No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA900.12237239278818698No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC880.11965300628178283No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGATAATGAAGAAACAAAGGTTGGT880.11965300628178283No Hit
GGAAGTAAAAGTCGTAACAAGGGGTAAGCTGAGGGGATGCGTTGGCATCG810.11013515350936828No Hit
GGAAGTAAAAGTCGTAACATGAGTGCAGGCTTCCAGGAACTGGCAACAGG790.10741576700296412No Hit
GGAAGTAAAAGTCGTAACAAGGATGCATACAAGGGTCGAGGAAAGACAGG780.10605607374976206No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACATCTCCGGCA780.10605607374976206No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCCGACGTCAT770.10469638049655998No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCGGACGTCAT740.10061730073695374No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)