FastQCFastQC Report
Sun 21 May 2023
EGAF00007832822

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832822
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70993
Sequences flagged as poor quality0
Sequence length236-238
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1606122.623357232403194No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT814711.475779302184723No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT752010.592593635992282No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG58778.27828095727748No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA31134.384939360218612No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG26413.7200850788105875No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT22073.108757201414224No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT20302.859436845886214No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT16932.3847421576775174No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTGGCTGCGTTCTTCATCGA12921.819897736396546No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT7311.029678982434888No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG6460.909948868198273No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA6290.8860028453509502No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTCGCTGCGTTCTTCATCGA6220.87614271829617No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTGGCTGCGTTCTTCATCGATG6060.8536052850281013No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG5380.7578211936388094No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTGGCTGCGTTCTTCATCGG5020.707111968785655No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA4980.7014776104686377No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4820.6789401772005691No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTTGCTGCGTTCTTCATCGA4350.6127364669756173No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTAGCTGCGTTCTTCATCGA3580.5042750693730368No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC3290.46342597157466225No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA3260.45920020283689944No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTCGCTGCGTTCTTCATCGATG2850.4014480300874734No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTTGCTGCGTTCTTCATCGG2840.4000394405082191No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT2710.38172777597791335No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTCGCTGCGTTCTTCATCGG2650.37327623850238756No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA2540.35778175313059035No Hit
GCTGCGTTCTTCATCGATGGCAAAGGTCACTGGCTGCGTTCTTCATCGAT2270.3197498344907244No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2190.30848111785669013No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2150.30284675953967294No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTGGCTGCGTTCTTCATCGGCT2000.28171791585085854No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTAGCTGCGTTCTTCATCGG1960.2760835575338414No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1890.26622343047906133No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTTGCTGCGTTCTTCATCGATG1880.264814840899807No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1820.25636330342428126No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1770.24932035552800982No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1760.24791176594875552No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1730.24368599721099263No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTAGCTGCGTTCTTCATCGATG1710.24086881805248403No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1550.21833138478441536No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1370.1929767723578381No Hit
GCTGCGTTCTTCATCGATGCGATAGCCGAGATATCCGTTGCCGAGAGTCG1260.17748228698604088No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC1180.1662135703520065No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1170.16480498077275224No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1130.15917062245573507No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1090.1535362641387179No Hit
GCTGCGTTCTTCATCGATGTATTCCTTTGTAGCATCAGCCGGGAAAGTCA1070.1507190849802093No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1070.1507190849802093No Hit
GCTGCGTTCTTCATCGATGCTCCATGTTATATGGATTTCATAACTAATAC1060.14931049540095503No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCTAGAGTCG1050.1479019058217007No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCCGACGATCGGGCAAACT1010.14226754750468357No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG990.13945036834617497No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA980.1380417787669207No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT960.1352245996084121No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTCGCTGCGTTCTTCATCGGCT940.1324074204499035No Hit
GCTGCGTTCTTCATCGATGGCAAAGGTCACTCGCTGCGTTCTTCATCGAT930.13099883087064923No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTAGCTGCGTTCTTCATCGGCT900.12677306213288636No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGATAGTCG900.12677306213288636No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG880.12395588297437776No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA880.12395588297437776No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTTGCTGCGTTCTTCATCGGCT850.11973011423661488No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC850.11973011423661488No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAAGTCA840.11832152465736058No Hit
GCTGCGTTCTTCATCGATGCGCTCGCAGATGTAGCCGGCAGGCATGTCGT840.11832152465736058No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG780.10986998718183483No Hit
GCTGCGTTCTTCATCGATGCCGACGACCGGGTCCAGGGGCACGCGGGCCA780.10986998718183483No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC730.10282703928556336No Hit
GCTGCGTTCTTCATCGATGGCAAAGGTCACTTGCTGCGTTCTTCATCGAT730.10282703928556336No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT720.10141844970630907No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)