FastQCFastQC Report
Sun 21 May 2023
EGAF00007832837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90193
Sequences flagged as poor quality0
Sequence length247-250
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3083034.18225361169935No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC1785319.79421906356369No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC58906.53044027807036No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGTTAATAATGCCGTCATCGCCCATC39164.3418003614471194No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG37914.203208674730855No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC34193.7907598150632533No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC21842.4214739503065648No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC19242.133203241936736No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC12471.3825906666814498No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC10951.2140631756344726No Hit
GGAAGTAAAAGTCGTAACAAGCCAAAACCTGTGACATCAGTCATCGCTTT8750.9701418070138481No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT8250.9147051323273425No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG6380.7073719689998115No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC6150.681871098644019No Hit
GGAAGTAAAAGTCGTAACAAGGACAAGCAATCGGGATTTTAGCCGGTGAA4380.4856252702537891No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC4040.4479283314669653No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT3650.4046877252114909No Hit
GGAAGTAAAAGTCGTAACAAGGTTTAAAAAATATCTGATCCACGATGAAA3650.4046877252114909No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT3290.36477331943720687No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA2870.3182065127005422No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGCTGGATC2490.2760746399387979No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC2470.27385717295133766No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG2350.26055237102657636No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC2110.23394276717705365No Hit
GGAAGTAAAAGTCGTAACAAGGTTGATGGTAGTAAATGAATTATTGCCAC2000.22174669874602243No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACTGAATCCGAAAAGAGCACA1990.2206379652522923No Hit
GGAAGTAAAAGTCGTAACAAGGCGGTCAACCTCGCAGACTACCTCCCTAT1990.2206379652522923No Hit
GGAAGTAAAAGTCGTAACAAGGTGACGGGGATAGTTGCGAGTAGTGTCCA1920.21287683079618153No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC1760.19513709489649972No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA1720.1907021609215793No Hit
GGAAGTAAAAGTCGTAACAAGGCGAAATATACGGTAAACCGTACTGTCTT1600.17739735899681794No Hit
GGAAGTAAAAGTCGTAACAAGGGCAGGGGCGACTACTCTTCTGGAATTGG1570.1740711585156276No Hit
GGAAGTAAAAGTCGTAACAAGGTCAGTCGCACCGTGACTTCCGACAATCA1370.15189648864102537No Hit
GGAAGTAAAAGTCGTAACAAGGATCTTAGCGACTTGCTGCGTGAGATAGA1350.14967902165356514No Hit
GGAAGTAAAAGTCGTAACAAGGTTGGCGGGATTTACACAGTTCTTTCGAC1300.14413535418491458No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTTGGTGAACCAGCGGAGGGATC1180.13083055226015322No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGGTGTGGTGTTCCAAGCAAGGCAGG940.10422094841063052No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGAGCGAGGAGCGCAATCGTGAGAT930.10311221491690042No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCCACAATGCCGGCCATACTTTGGTC920.10200348142317031No Hit
GGAAGTAAAAGTCGTAACAAGGCCATCGGGCAGTTCGACCTGTTCGGCGC910.1008947479294402No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)