FastQCFastQC Report
Sun 21 May 2023
EGAF00007832838

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832838
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90193
Sequences flagged as poor quality0
Sequence length235-238
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3057533.89952657079818No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1102512.223786768374485No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA65147.22228997815795No Hit
GCTGCGTTCTTCATCGATGCCATGAACCGTTTGCGCTACGACGACAGGCT38574.276385085317043No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG38304.2464492809863295No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT31863.5324249110241372No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG30463.3772022219019213No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT26042.887142017673212No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA16151.7906045923741312No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA15751.7462552526249266No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT12871.4269400064306543No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC8790.9745767409887686No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT6150.681871098644019No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT6090.6752186976816382No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA6060.6718924972004479No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA6000.6652400962380672No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT5580.6186732895014025No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA4440.4922776712161698No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG3750.415775060148792No Hit
GCTGCGTTCTTCATCGAATCTAATTAGCGAACCGTTGCCTCTATGCAACT3640.4035789917177608No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT3370.37364318738704777No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3310.36699078642466715No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC2940.325967647156653No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT2870.3182065127005422No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2860.31709777920681204No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2810.3115541117381615No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTGTCAAGAACGAGTTCGTAAT2560.2838357743949087No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA2310.2561174370516559No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACAATGTGTT2270.25168250307673545No Hit
GCTGCGTTCTTCATCGATGCACCTTTCAATCTTAAATACTACAAAAAGGG2250.2494650360892752No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA2170.24059516813943432No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC2170.24059516813943432No Hit
GCTGCGTTCTTCATCGATGCGGGGGCTGCTACCGAAGTGTAGGCGAGCGG2140.23726896765824396No Hit
GCTGCGTTCTTCATCGATATTCCCGCGGCTGGCGAATCGAGCTTCAGCAA1940.21509429778364175No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT1800.19957202887142017No Hit
GCTGCGTTCTTCATCGATGCAGGAGTCGCGCGCCGACCGGCGAAATCGCA1620.17961482598427816No Hit
GCTGCGTTCTTCATCGATGCCCGCCTGTCAAATGGCCGTTAGGGATGATG1580.1751798920093577No Hit
GCTGCGTTCTTCATCGATACCGGTCGCTTTGGAAACCGCCGTGCGGACAT1440.15965762309713613No Hit
GCTGCGTTCTTCATCGATGCTGTCTGCGTAATCGTGGATTGTCTTATGAC1360.15078775514729525No Hit
GCTGCGTTCTTCATCGATGCTTGGGAATAGGTTGCTGAACGAACGACTTT1330.1474615546661049No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT1270.14080915370372424No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT1190.13193928575388333No Hit
GCTGCGTTCTTCATCGATGCACTGCGCAAGAAGGAGGCGAAAACATGGCT1010.11198208286674133No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG980.10865588238555099No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG970.10754714889182088No Hit
GCTGCGTTCTTCATCGATGCGGGATCGATGGGGCGTGTGCGAGCCTGTGG920.10200348142317031No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)