FastQCFastQC Report
Sun 21 May 2023
EGAF00007832840

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832840
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76078
Sequences flagged as poor quality0
Sequence length235-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG1273716.742027918715003No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT992513.045821393832647No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT857011.264754593969348No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT774010.17376902652541No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT58067.63164121033676No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG33604.416519887483898No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT31254.107626383448566No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCGA27863.6620310733720656No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA12601.6561949578064616No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT11691.5365808775204395No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACTGCTGCGTTCTTCATCGA10281.3512447750992402No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACCGCTGCGTTCTTCATCGA9741.280264991193249No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCGG8821.1593364704645233No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA7120.9358815952049213No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACAGCTGCGTTCTTCATCGA6900.9069639054654433No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTAAAAGTTG6580.86490181129893No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG5070.6664213044506954No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4830.6348747338258104No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG4770.6269880911695891No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCTT3820.5021162491127527No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT3450.4534819527327216No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACTGCTGCGTTCTTCATCGG3300.43376534609216855No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG3240.42587870343594736No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC3130.41141985856620833No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACCGCTGCGTTCTTCATCGG3120.4101054181235049No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT2850.3746155261705092No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACAGCTGCGTTCTTCATCGG2710.3562133599726596No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2520.33123899156129233No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG2200.28917689739477903No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT2190.2878624569520755No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA2070.272089171639633No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1910.2510581245563763No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACTGCTGCGTTCTTCATCTT1520.19979494729093825No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA1500.19716606640553117No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1360.1787639002076816No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT1240.1629906148952391No Hit
GCTGCGTTCTTCATCGGTTCAGGTGTACGGCTGCGTTCTTCATCGGTTCA1160.15247509135361076No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACCGCTGCGTTCTTCATCTT1080.14195956781198243No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1030.13538736559846473No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGT960.12618628249953995No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACAGCTGCGTTCTTCATCTT950.1248718420568364No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG920.12092852072872577No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTTTTGAAAGTTT920.12092852072872577No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT910.11961408028602223No Hit
GCTGCGTTCTTCATCGATGCCGGAAACAAGAGATCCGTTGTTGAAAGTTT900.1182996398433187No Hit
GCTGCGTTCTTCATCGATGGGAGAACCTAGAGATCCGTTGTCGAAAGTTG850.111727437629801No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT800.10515523541628329No Hit
GCTGCGTTCTTCATCGATGCGTTCAGGTGTACGGCTGCGTTCTTCATCGT790.10384079497357974No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT790.10384079497357974No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT780.10252635453087622No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT780.10252635453087622No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)