FastQCFastQC Report
Sun 21 May 2023
EGAF00007832846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63834
Sequences flagged as poor quality0
Sequence length236-238
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1256019.67603471504214No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT974015.258326283798604No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG46767.325249866842122No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG46647.3064511075602345No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT38135.97330576181972No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG33315.218222263997243No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG20553.2192875270232166No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT20323.183256571732932No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTGGCTGCGTTCTTCATCGA18802.945138954162359No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG13022.0396653820847823No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA10641.666823322994016No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT9331.461603534166745No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTCGCTGCGTTCTTCATCGA8831.383275370492214No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTTGCTGCGTTCTTCATCGA8001.253250618792493No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG7101.1122599241783375No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTAGCTGCGTTCTTCATCGA7051.1044271078108845No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA6401.0026004950339944No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA4940.7738822571043644No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA4450.6971206567033242No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTGGCTGCGTTCTTCATCGG4120.645424068678134No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT3950.6187924930287935No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3370.5279318231663377No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACCGTGATGTCTTC2650.4151392674750133No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2400.3759751856377479No Hit
GCTGCGTTCTTCATCGATGCTCGATAGGCTGGCTGCGTTCTTCATCGATG2030.3180123445185951No Hit
GCTGCGTTCTTCATCGATGCCTCGATAGGCTGGCTGCGTTCTTCATCGAT2000.31331265469812325No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1730.27101544631387664No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTAGCTGCGTTCTTCATCGG1570.24595043393802676No Hit
GCTGCGTTCTTCATCGATGGGAGAACCTAGAGATCCGTTGTCGAAAGTTG1540.24125074411755493No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGTTATTTACTTCGCAAATCA1540.24125074411755493No Hit
GCTGCGTTCTTCATCGATGTCTCGATAGGCTGGCTGCGTTCTTCATCGAT1540.24125074411755493No Hit
GCTGCGTTCTTCATCGATGCTGTGTCTAACAGCAAAGTGGAGAATAAGGA1530.2396841808440643No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTACAAATTA1430.2240185481091581No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTTGCTGCGTTCTTCATCGG1420.22245198483566753No Hit
GCTGCGTTCTTCATCGATGCTGTGGTGGTGACGGTGGCTGCTGCGCTGGG1360.2130526051947238No Hit
GCTGCGTTCTTCATCGATGCGCTGATCTCGCAGATGAGCGAGCAGCCCAT1350.21148604192123321No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTCGCTGCGTTCTTCATCGG1290.2020866622802895No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1190.18642102954538334No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1010.15822289062255226No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1000.15665632734906162No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA960.15039007425509918No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC950.14882351098160856No Hit
GCTGCGTTCTTCATCGATGCCTCGATAGGCTCGCTGCGTTCTTCATCGAT890.13942413134066486No Hit
GCTGCGTTCTTCATCGATGCTCGATAGGCTCGCTGCGTTCTTCATCGATG870.1362910047936836No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTA870.1362910047936836No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTGGCTGCGTTCTTCATCGC830.13002475169972116No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTAAGAGATCCGTTGTTGAAAGTTG820.12845818842623055No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT740.1159256822383056No Hit
GCTGCGTTCTTCATCGATGCCGTTGTCGACCGCTTCGCGGATCAGGTGGT690.10809286587085254No Hit
GCTGCGTTCTTCATCGATGCCTCGATAGGCTTGCTGCGTTCTTCATCGAT670.10495973932387129No Hit
GCTGCGTTCTTCATCGATGCTTTCGATGCGGGCTTTGGTGTGGGAAGTGT670.10495973932387129No Hit
GCTGCGTTCTTCATCGCTGTCAGATACCTTGGCATCCTTCGTATGCCCTT650.10182661277689006No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)