FastQCFastQC Report
Sun 21 May 2023
EGAF00007832852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70539
Sequences flagged as poor quality0
Sequence length237-238
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGAT2017628.602616992018596No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT796111.285955287146118No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT785211.131430839677343No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT38045.39276145111215No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGGC31184.4202497908958165No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG27543.904223195678986No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT21893.1032478487078072No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG17812.5248444123109204No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG13651.9350997320631143No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT10781.5282326089113822No Hit
GCTGCGTTCTTCATCGATGGGTCCAAGGTCTGCTGCGTTCTTCATCGATG7611.0788358213187033No Hit
GCTGCGTTCTTCATCGATGGTCCAAGGTCTGCTGCGTTCTTCATCGATGG7020.995194147918173No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG6740.9554997944399553No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA6420.9101348190362778No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT4710.6677157317228767No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT4380.6209331008378344No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGCC4280.6067565460241852No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA4130.5854917138037115No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG3570.5061030068472759No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT3060.43380257729766514No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA3010.42671429989084053No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG2990.4238789889281107No Hit
GCTGCGTTCTTCATCGATGGTCCAAGGTCTGCTGCGTTCTTCATCGATGC2880.40828477863309665No Hit
GCTGCGTTCTTCATCGATGCCTCCCCAGTATCTCCTGCTCTCTTTTGCAT2780.3941082238194474No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCTTT2550.3615021477480542No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT2420.34307262649031034No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC2280.3232254497512015No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG2190.3104665504189172No Hit
GCTGCGTTCTTCATCGATGCTAGTGCCAAGAGATCCATTGTCAAAAGTTG2080.2948723401239031No Hit
GCTGCGTTCTTCATCGATGCCTGGGTTCCCGTCAACACCAGGAACATCGC1980.28069578531025385No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCTGGGAAAGTCA1890.2679368859779696No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1870.2651015750152398No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1810.25659564212705027No Hit
GCTGCGTTCTTCATCGATGTCCCCCTCTGCCTGCTGCGTCTTCTCCACCT1770.2509250202015906No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1710.2424190873134011No Hit
GCTGCGTTCTTCATCGATGTGGTCCAAGGTCTGCTGCGTTCTTCATCGAT1610.2282425324997519No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCTCACGA1510.21406597768610275No Hit
GCTGCGTTCTTCATCGATGGTCCAAGGTCTGCTGCGTTCTTCATCGGCTC1460.20697770027927812No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1460.20697770027927812No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1460.20697770027927812No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCCTT1300.18429521257743942No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1290.1828775570960745No Hit
GCTGCGTTCTTCATCGATGCGGACAAGTCCGTGTGCGCCCGCATCGGTGA1180.1672833468010604No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT1170.16586569131969547No Hit
GCTGCGTTCTTCATCGATGGGTCCAAGGTCTGCTGCGTTCTTCATCGGCT1080.1531067919874112No Hit
GCTGCGTTCTTCATCGATCTGCTTCCAATCTGTGGACTCAAGAAAGACTG1070.1516891365060463No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT1040.14743617006195156No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1030.14601851458058662No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCAGC970.13751258169239713No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG880.12475368236011285No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCGAGATATCCGTTGCCGAGAGTCG830.11766540495328824No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG740.10490650562100397No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT740.10490650562100397No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)