FastQCFastQC Report
Sun 21 May 2023
EGAF00007832872

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832872
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133053
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT3454525.963337917972538No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3080923.15543430061705No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1455310.93774661225226No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG1399510.518364862122613No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA70085.267074023133639No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT47333.557229074128355No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG21121.5873373768347951No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTTG16831.2649094721652274No Hit
GCTGCGTTCTTCATCGATGCCTCCCCAGTATCTCCTGCTCTCTTTTGCAT12120.9109151992063312No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT9800.7365485934176607No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA9360.7034790647336024No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG9090.6831863994047485No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG5960.447941797629516No Hit
GCTGCGTTCTTCATCGACTCCCAAAACCACACACATGAAGTATGTGCGGT5820.4374196748664066No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT5730.43065545309012193No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC5300.39833750460342876No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG4790.36000691453781575No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCCGCTGCGTTCTTCATCGA4580.34422373039315163No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCGGCTGCGTTCTTCATCGA4420.3321984472353122No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC3490.26230148888037097No Hit
GCTGCGTTCTTCATCGTTACGGGAGCCAAGATATCCGTTGTTGAGAGTTG3460.2600467482882761No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA3430.2577920076961812No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCTGCTGCGTTCTTCATCGA3250.24426356414361194No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC3020.22697721960421788No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATTAAAATAA3010.2262256394068529No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT2920.21946141763056828No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA2870.2157035166437435No Hit
GCTGCGTTCTTCATCGATGCCTGGGTTCCCGTCAACACCAGGAACATCGC2710.2036782334859041No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGGGATATCCGTTGCCGAGAGTCA2610.19616243151225451No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCGGCTGCGTTCTTCATCGAT2530.19014978993333484No Hit
GCTGCGTTCTTCATCGATGCCGGTGAATTATGCGATGGTGGTGGCGGCGG2510.18864662953860492No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2470.18564030874914506No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGACGAGAGTCG2420.18188240776232026No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2400.18037924736759037No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2350.17662134638076557No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCAGCTGCGTTCTTCATCGA2210.1660992236176561No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG2210.1660992236176561No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG2110.15858342164400652No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCCGCTGCGTTCTTCATCGAT2000.15031603947299196No Hit
GCTGCGTTCTTCATCGATGTCCCCCTCTGCCTGCTGCGTCTTCTCCACCT1890.1420486573019774No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1870.1405454969072475No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT1800.13528443552569278No Hit
GCTGCGTTCTTCATCGAACCAACCGTTCGGCTGCGTTCTTCATCGAACCA1690.12701705335467822No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1510.11348860980210894No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1470.11048228901264909No Hit
GCTGCGTTCTTCATCGATGCACACATGGGGGCCACGTCAGGTGACCACTC1380.10371806723636445No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)