FastQCFastQC Report
Sun 21 May 2023
EGAF00007832888

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832888
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67428
Sequences flagged as poor quality0
Sequence length235-238
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT3111946.151450436020646No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT867612.867058195408434No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG771211.437385062585276No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG28534.2311799252536035No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT25623.799608471258231No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG10251.5201400011864508No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC6931.0277629471436198No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG6540.9699234739277451No Hit
GCTGCGTTCTTCATCGATGCTGTCCGCGTAATCGTAGATTGTCTTATGAC5780.857210654327579No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT5370.7964050542801211No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA5120.7593284688853296No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT2490.36928279053212315No Hit
GCTGCGTTCTTCATCGATGCCGAGCTGTTCTTGCGTTGCGTAGATGACAC2410.3574182832057899No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTACCCTTCGCACATCTGCG2400.3559352197899982No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT2340.34703683929524826No Hit
GCTGCGTTCTTCATCGATGCGGTTATGACGTCGGCTGCGTTCTTCATCGA2240.3322062051373317No Hit
GCTGCGTTCTTCATCGATGCGGTTATGACGTCCGCTGCGTTCTTCATCGA2100.31144331731624847No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1680.24915465385299873No Hit
GCTGCGTTCTTCATCGATGCAGAGCATACCGTTGTCACCGTTCCTCCGGC1560.23135789286349884No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACTAATGTGT1550.22987482944770718No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT1420.21059500504241563No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1410.20911194162662397No Hit
GCTGCGTTCTTCATCGATGCGGTTATGACGTCTGCTGCGTTCTTCATCGA1350.200213561131874No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1310.19428130746870736No Hit
GCTGCGTTCTTCATCGATGCCTAGTGCCAAGGCATCCACCGTATGCCCTT1290.19131518063712405No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT1190.17648454647920744No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT1180.17500148306341579No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAAC1170.17351841964762413No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT1150.1705522928160408No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT1120.16610310256866584No Hit
GCTGCGTTCTTCATCGATGCGGTTATGACGTCAGCTGCGTTCTTCATCGA1110.16462003915287418No Hit
TCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1050.15572165865812423No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT1050.15572165865812423No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT1050.15572165865812423No Hit
GCTGCGTTCTTCATCGATGCCCTGTGGGTACTTGCCAGCCAAATGAAGAC1000.14830634157916592No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT990.14682327816337426No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT980.14534021474758263No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA930.1379248976686243No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC870.12902651717387437No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT870.12902651717387437No Hit
GCTGCGTTCTTCATCGATGCGCCTGACAAGGATGCCATAGAGGGAAATAT840.12457732692649937No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGACAAACT760.11271281960016612No Hit
GCTGCGTTCTTCATCGATGCGGTTATGACGTCGGCTGCGTTCTTCATCGG750.11122975618437445No Hit
GCTGCGTTCTTCATCGATGCCCACCAAGCGCCCCCGCGGGGAAAGGCGAT750.11122975618437445No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAGGCCGGACGATCGGGCAAACT730.10826362935279113No Hit
GCTGCGTTCTTCATCGATGGGAGAACCTAGAGATCCGTTGTCGAAAGTTG710.10529750252120781No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG710.10529750252120781No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA710.10529750252120781No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT680.10084831227383283No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)