FastQCFastQC Report
Sun 21 May 2023
EGAF00007832900

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832900
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73354
Sequences flagged as poor quality0
Sequence length235-238
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2114128.820514218720177No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1504520.510128963655696No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1080614.73130299642828No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT70559.617744090301825No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG16272.218011287728004No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT11561.575919513591624No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA10901.4859448700820679No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT9581.305995583062955No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA7110.9692722959893121No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT3940.537121356708564No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3380.4607792349428797No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTTGCGCATCTGCG3240.4416937045014587No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT2750.37489434795648496No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT2730.37216784360771055No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT2720.37080459143332334No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT2680.3653515827357745No Hit
GCTGCGTTCTTCATCGATGCCTGGGTTCCCGTCAACACCAGGAACATCGC2610.35580881751506394No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2500.34081304359680453No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG1960.2671974261798948No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1770.2412956348665376No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1700.2317528696458271No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA1660.2262998609482782No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT1610.21948360007634213No Hit
GCTGCGTTCTTCATCGATGCCGTTGTCGACCGCTTCGCGGATCAGGTGGT1580.21539384355318048No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT1540.2099408348556316No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1450.19767156528614663No Hit
GCTGCGTTCTTCATCGATGCAGAGCATACCGTTGTCACCGTTCCTCCGGC1350.18403904354227443No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1300.17722278267033836No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1300.17722278267033836No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA1180.16086375657769175No Hit
GCTGCGTTCTTCATCGATGCGAGAGACGAGATATCCGTTGCCGAGAGTCG1140.15541074788014286No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTGTCAAGAACGAGTTCGTAAT1050.1431414783106579No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1010.13768846961310904No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT980.1335987130899474No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG970.13223546091556015No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG900.12269269569484963No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG880.1199661913460752No Hit
GCTGCGTTCTTCATCGATGCCAATCTCACGACCACAACCTTGATATGCTA880.1199661913460752No Hit
GCTGCGTTCTTCATCGATGCCGAACAGTGTTAAATCCTTACCCGTGTAGT870.11860293917168797No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG870.11860293917168797No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGCCAAAATAAACTTC830.1131499304741391No Hit
GCTGCGTTCTTCATCGATGCCTTCGTAGCGGCCGCATAACAAAATCAATT780.10633366960220302No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA750.10224391307904136No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)