FastQCFastQC Report
Sun 21 May 2023
EGAF00007832908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74961
Sequences flagged as poor quality0
Sequence length235-238
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT3118241.59763076799936No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT59627.9534691372847215No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT41945.594909352863489No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG22472.9975587305398808No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG22332.9788823521564547No Hit
GCTGCGTTCTTCATCGATGCTCCATGTTATATGGATTTCATAACTAATAC20842.7801123250757063No Hit
GCTGCGTTCTTCATCGATGCGGATTATCGGGGAGAAATCGGCGTAATCTT14121.8836461626712555No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT14111.8823121356438683No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG10711.4287429463320929No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT10331.3780499192913649No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT9151.220634730059631No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT9051.2072944597857551No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAAGTCA9051.2072944597857551No Hit
GCTGCGTTCTTCATCGATGCCTTCCCGATTCGCCTGACAGGAGGACGAAG8441.125918811115113No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT8311.1085764597590748No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT8311.1085764597590748No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTGCGCT7541.0058563786502315No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC6570.8764557569936366No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3620.4829177839143021No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3010.40154213524366006No Hit
GCTGCGTTCTTCATCGATGCATGGTCATCATGTGGTGAGAAATCTTCTAA2550.3401768919838316No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT2410.32150051360040555No Hit
GCTGCGTTCTTCATCGATGCCCTTGCCGAGCGCCACGGTGTTTCGTACTG2300.3068262162991422No Hit
GCTGCGTTCTTCATCGATGCCCTGTGGGTACTTGCCAGCCAAATGAAGAC2210.29481997305265406No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACGA2200.29348594602526645No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT2100.28014567575139077No Hit
GCTGCGTTCTTCATCGATGAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT2070.276143594669228No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT1990.26547137845012736No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG1720.22945264871066287No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1570.20944224329984923No Hit
GCTGCGTTCTTCATCGATGCATGGTATCTATACAGAGAATGTTGGGGCTA1520.20277210816291139No Hit
GCTGCGTTCTTCATCGATGCTCACTGACGATCCCTACCACCTCGCTCCCT1480.1974360000533611No Hit
GCTGCGTTCTTCATCGATGCCTGCGGATGCAATTGCCTCGACACTCGGGT1320.17609156761515987No Hit
GCTGCGTTCTTCATCGATGCGCGCAGGAACGCCGTTCCGTACAGGGGTCC1300.17342351356038474No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAGTCCACTGCTACCA1270.169421432478222No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1250.16675337842344684No Hit
GCTGCGTTCTTCATCGATGCTCTCTATAACGTTATAGCTATTGGGATGAG1160.15474713517695868No Hit
GCTGCGTTCTTCATCGATGCACAGAACATTTACCACAAAATGGAACGCCG1150.1534131081495711No Hit
GCTGCGTTCTTCATCGATGCCAGTACCAAGTGCCTTACGGACACCACGAG1150.1534131081495711No Hit
GCTGCGTTCTTCATCGATGAAGTGAGAGAAATTTGTTCTTGTCCGAGGTG1100.14674297301263323No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1100.14674297301263323No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1090.14540894598524567No Hit
GCTGCGTTCTTCATCGATTCTTTTCAAAGATCCGCTTTTTCATTAAAAAG1070.14274089193047051No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA1060.14140686490308293No Hit
GCTGCGTTCTTCATCGATGTGCATCGGGGTGCGCACGCCCGCAACGACGT1060.14140686490308293No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT1050.14007283787569538No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1040.13873881084830778No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1020.13607075679353264No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA990.1320686757113699No Hit
GCTGCGTTCTTCATCGATGCAACACCGAAGACTATCCGCAGCTCGCACGT960.1280665946292072No Hit
GCTGCGTTCTTCATCGATCTGAAAGAGCTCGGGATGCGCCCAGGCATCCG960.1280665946292072No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT950.1267325676018196No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG930.12406451354704447No Hit
GCTGCGTTCTTCATCGATGCTATTGTCCACAGTGTCTGCTATCCAAAATA920.12273048651965689No Hit
GCTGCGTTCTTCATCGATGCACCAGGATCTGATCAAAAATCACCGTTTAA900.12006243246488174No Hit
GCTGCGTTCTTCATCGATGCCTGCGGATGCAATTGCCTCGACACTCGGAA880.1173943784101066No Hit
GCTGCGTTCTTCATCGATGCTAACCTCACCGCTCTTTGGACGCAACAAAC870.116060351382719No Hit
GCTGCGTTCTTCATCGATGCGGTACCGACTTCGAAGACTTGCAGGATGGC850.11339229732794387No Hit
GCTGCGTTCTTCATCGATGCCGGTAACGTGTGGCTCCTTCGTCCCGATGA830.11072424327316871No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT800.10672216219100598No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC790.10538813516361842No Hit
GCTGCGTTCTTCATCGATGCGCTGTCGGTCGGTTTTACCATTGCGAACTA760.10138605408145569No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)