FastQCFastQC Report
Sun 21 May 2023
EGAF00007832909

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832909
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101090
Sequences flagged as poor quality0
Sequence length247-250
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC4683946.333959837768326No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC2631826.034226926501137No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA86188.525076664358492No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC53305.2725294292214855No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG23492.323671975467405No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC12831.269166089623108No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC9030.8932634286279553No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG5440.5381343357404293No Hit
GGAAGTAAAAGTCGTAACAAGGCATTGAAGGTTTGGTACACGTTTCCGAA5060.500544069640914No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC2830.27994856068849544No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT2760.2730240379859531No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTAGGATAAAGCA2730.2700563853991493No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC2380.23543377188643783No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC2000.19784350578692256No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT1400.13849045405084578No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG1360.13453358393510734No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATC1270.1256306261746958No Hit
GGAAGTAAAAGTCGTAACAAGGACAAGCAATCGGGATTTTAGCCGGTGAA1220.12068453853002276No Hit
GGAAGTAAAAGTCGTAACAAGGGACAGGCCGACGGCGACAACGACGAATG1200.11870610347215352No Hit
GGAAGTAAAAGTCGTAACAAGGATTTGCGCAGGTTGAAGGTGGTGTGCAC1160.11474923335641507No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC1130.11178158076961123No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)