FastQCFastQC Report
Sun 21 May 2023
EGAF00007832916

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832916
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138149
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT2814720.37437838855149No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGAT1521311.012023250258778No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1392110.076801135006406No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG120448.718123185835584No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG108157.828504006543659No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG92526.697116881048723No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG76065.505649697066211No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT64454.6652527343665176No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT33992.46038697348515No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT28262.045617413082976No Hit
GCTGCGTTCTTCATCGATGCTGGTCAGACGAGCTGCGTTCTTCATCGATG18271.3224851428530064No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT17921.297150178430535No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCTTT15521.123424708105017No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT9840.7122744283346242No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG8090.5855996062222673No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT7810.5653316346842902No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGGC7770.5624362101788649No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA7350.5320342528718992No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC6400.46326792086804824No Hit
GCTGCGTTCTTCATCGATGGGAGAGCCAAGAGATCCGTTGCTGAAAGTTG5550.40174015012776054No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGCC5150.3727859050735076No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC3740.2707221912572657No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTA3740.2707221912572657No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT3710.2685506228781967No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG3580.2591404932355645No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA2950.213537557275116No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT2730.19761272249527684No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2660.19254572961078256No Hit
GCTGCGTTCTTCATCGACGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2500.18096403158908134No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTT2440.1766208948309434No Hit
GCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGTTT2350.17010618969373648No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTG2040.1476666497766904No Hit
GCTGCGTTCTTCATCGATGCTGGTCAGACGAGCTGCGTTCTTCATCTTTT2030.14694279365033405No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGTTG2000.14477122527126507No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1940.14042808851312713No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT1680.12160782922786266No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT1610.1165408363433684No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1590.11509312409065575No Hit
GCTGCGTTCTTCATCGATGCCCGAACCAAGAGATCCGTTGTTGAAAGTTT1580.11436926796429941No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACCGTGATGTCTTC1490.10785456282709248No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1470.10640685057437985No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)