FastQCFastQC Report
Sun 21 May 2023
EGAF00007832918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68495
Sequences flagged as poor quality0
Sequence length235-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1471421.481859989780276No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG859612.54982115482882No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT62539.129133513395137No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA60278.799182422074605No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG51837.566975691656324No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG34305.007664793050588No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT24713.6075625958099127No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG22963.3520694941236586No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC19232.8075041973866703No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTGGCTGCGTTCTTCATCGA16972.477553106066136No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT16762.4468939338637856No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT10271.4993795167530477No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG7341.0716110665012044No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTCGCTGCGTTCTTCATCGA6710.9796335498941529No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTTGCTGCGTTCTTCATCGA6680.9752536681509599No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTAGCTGCGTTCTTCATCGA5690.830717570625593No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTGGCTGCGTTCTTCATCGG4980.727060369370027No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTGAAAGTTG3360.4905467552376086No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2920.4263084896707789No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA2720.39710927804949264No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT2330.34017081538798455No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT2060.30075187969924816No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2030.2963719979560552No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTCGCTGCGTTCTTCATCGG1820.26571282575370464No Hit
GCTGCGTTCTTCATCGATGCTCATGAGACACTTTCATGAGCATTGATATC1670.24381341703773998No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTAGCTGCGTTCTTCATCGG1610.2350536535513541No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTTGCTGCGTTCTTCATCGG1600.23359369297028978No Hit
GCTGCGTTCTTCATCGATGCCTCGATAGGCTGGCTGCGTTCTTCATCGAT1560.22775385064603254No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1530.22337396890283961No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1520.2219140083217753No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT1330.1941747572815534No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGACAAAATAAACTTC1270.18541499379516754No Hit
GCTGCGTTCTTCATCGATGCTCGATAGGCTGGCTGCGTTCTTCATCGATG1190.17373530914665303No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1110.16205562449813854No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1110.16205562449813854No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1090.15913570333600993No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA1040.15183590043068837No Hit
GCTGCGTTCTTCATCGATGTCTCGATAGGCTGGCTGCGTTCTTCATCGAT1030.15037593984962408No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGTTG1030.15037593984962408No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT900.131396452295788No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC890.12993649171472368No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGTTG870.12701657055259508No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC840.12263668880940215No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT830.12117672822833785No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA800.11679684648514489No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTA740.10803708299875904No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG730.10657712241769472No Hit
GCTGCGTTCTTCATCGATGCTCTCGATAGGCTGGCTGCGTTCTTCATCGC690.10073728009343746No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)