FastQCFastQC Report
Sun 21 May 2023
EGAF00007832926

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832926
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80452
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1804222.42579426241734No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1736821.58802764381246No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1484818.455725152886192No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT65648.158902202555561No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT39494.90851687963009No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT21782.7072042957291305No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC20512.549346194003878No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG18802.3367970964053097No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGACAAAATAAACTTC10901.3548451250435043No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG6890.8564112762889674No Hit
GCTGCGTTCTTCATCGATGCACTGGTTGCTTGATGTTCATTTTGACGAGG4950.6152737035748024No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT4700.5841992741013274No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT4140.5145925520807438No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG3860.4797891910704519No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTTCCGAGAGTCG2160.2684830706508229No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG2000.2485954357877989No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1970.24486650425098194No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCACTATGCGCCCTT1960.24362352707204296No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1740.21627802913538507No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTTG1660.20633421170387312No Hit
GCTGCGTTCTTCATCGATGCGACCGAACTCGATCTCTTCCAGCTCTTCCT1590.19763337145130017No Hit
GCTGCGTTCTTCATCGATACCGGTCGCTTTGGAAACCGCCCTGCGGACAT1460.18147466812509322No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1450.18023169094615424No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCCTGCGGACAT1320.16407298761994732No Hit
GCTGCGTTCTTCATCGATGCAAGAGCTGAGATATCCGTTGCCGAGAGTCA1150.1429423755779844No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCTGACGATCGGGCAAACT1120.13921344404116742No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG1090.13548451250435042No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1070.13299855814647243No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1040.12926962660965544No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCA1000.12429771789389946No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT980.12181176353602148No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCAAGAGTCA950.11808283199920448No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGTGAGTTG940.11683985482026549No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTAG930.1155968776413265No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT890.11062496892557054No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAGGTCA830.10316710585193656No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)