FastQCFastQC Report
Sun 21 May 2023
EGAF00007832945

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832945
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79656
Sequences flagged as poor quality0
Sequence length247-250
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC3659345.93878678316762No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA1865523.419453650698003No Hit
GGAAGTAAAAGTCGTAACAAGGTTAGTCGCACCGTAACTTCCGACAATCA39955.015315858190219No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC17162.154263332329015No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC14611.8341367881892137No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC14241.7876870543336347No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA10991.3796826353319274No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC7800.9792106056040976No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC7570.9503364467208999No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTGTTGAAAAAGCTGGTAATTGTCAT6480.8134980415787888No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG5050.6339760972180376No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC4710.5912925579993974No Hit
GGAAGTAAAAGTCGTAACAAGGAAGACAACTGAGGAATGGTGATGTTGCG3410.4280907903987145No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGAA3340.4193030029125238No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC3250.40800441900170736No Hit
GGAAGTAAAAGTCGTAACAAGGTTCCAGACCGAAGAGATAGAGCTGCGAT2120.26614442101034447No Hit
GGAAGTAAAAGTCGTAACAAGGAGTACGTGAACGAGAAAGCACTGCTTTC1950.2448026514010244No Hit
GGAAGTAAAAGTCGTAACAAGGAACGTTCAGCGATAGCTGCAGGTTTCCA1880.23601486391483378No Hit
GGAAGTAAAAGTCGTAACAAGGTGTTGCCGTCTTTGTCGGTAACATCTTT1780.22346088179170434No Hit
GGAAGTAAAAGTCGTAACAACAGGAGAGCGTCAGCCAATCGCCGCAATCG1560.1958421211208195No Hit
GGAAGTAAAAGTCGTAACAAGGACGCGACAGATACAAGCCTTACCTATTG1550.1945867229085066No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACAACTCTCCGGCA1490.1870543336346289No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTACGGCA1480.18579893542231596No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1380.17324495329918652No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC1320.16571256402530884No Hit
GGAAGTAAAAGTCGTAACAAGTCCTTGATCGGCGGCAGCGCCGCAATGGA1270.15943557296374408No Hit
GGAAGTAAAAGTCGTAACAAGGGTGACATCGTCGAGGTTTCGGAAGGCTA1230.1544139801144923No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGCCAGCGCAACAATAATCATCACAT1160.1456261926283017No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCGGGCGGCGTCGTAGCGGTAGCGGA1140.1431153962036758No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGAAACAGAATCCGAAAAGAGCACA1140.1431153962036758No Hit
GGAAGTAAAAGTCGTAACAAGGCGACAACAAATGCAGCGGTGGAACAAGC1140.1431153962036758No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGTGGCTGGAAC1130.14185999799136284No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCAGGCA1090.13683840514211107No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT1090.13683840514211107No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG1060.13307221050517223No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAGAATG1050.1318168122928593No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC940.11800743195741689No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT920.115496635532791No Hit
GGAAGTAAAAGTCGTAACAAGGGCACAGCATATCGGGGATTAGTCTATTC910.11424123732047807No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG890.11173044089585217No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC870.10921964447122628No Hit
GGAAGTAAAAGTCGTAACAAGGATACGAAAAGCGGCAAGGATGCCAGGGA870.10921964447122628No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACATCTCCGGCA870.10921964447122628No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGGAAGAAGTAATGGCAGTTATAAAC850.10670884804660039No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC850.10670884804660039No Hit
GGAAGTAAAAGTCGTAACAAGGTCGAGCAGAACAAGCTCACCGTCACGGG840.10545344983428744No Hit
GGAAGTAAAAGTCGTAACAAGGAGAAGGGGCAGACGGGTGTTAAGCTATT810.1016872551973486No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)