FastQCFastQC Report
Sun 21 May 2023
EGAF00007832946

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832946
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79656
Sequences flagged as poor quality0
Sequence length235-238
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT3218640.40624686150447No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1824322.90222958722507No Hit
GCTGCGTTCTTCATCGATGCTTGGAAACAGGTTGCTGAACGAACGACTTT40125.036657627799538No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT17592.208245455458471No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG13821.734960329416491No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG12471.5654815707542433No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT11321.4211107763382544No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG8191.0281711358843026No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG6330.7946670683940946No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAAGTCA6220.7808576880586522No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT6050.7595159184493322No Hit
GCTGCGTTCTTCATCGATGCTGTTTCAAACAGCAAAGTGGAGAATAAGGA4910.6164005222456563No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG4640.5825047705132068No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT4530.5686953901777644No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT3760.47202972782966757No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA3620.45445415285728635No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACTATCGGGCAAACT3600.4519433564326604No Hit
GCTGCGTTCTTCATCGATGCCTTCCTTAACGTGGACAAAGGATTGGTCAA3400.42683539218640154No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2700.3389575173244953No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2270.28497539419503864No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT2120.26614442101034447No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGTCAAACT2040.2561012353118409No Hit
GCTGCGTTCTTCATCGATGCACAGAACATTTACCACAAAATGGAACGCCG1820.22848247464095614No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1800.2259716782163302No Hit
GCTGCGTTCTTCATCGATGCTTCCTGCGTTAGCTTCGTACTGTTCCACTT1720.21592849251782664No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1700.21341769609320077No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1690.21216229788088783No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGTAATGGTAACTGCACCAAAATAC1590.19960831575775834No Hit
GCTGCGTTCTTCATCGATGCCGATGCGTTTGAGTCCTTTTAAGTTGGGGC1500.18830973184694183No Hit
GCTGCGTTCTTCATCGATGCTGTGGTGGTGACGGTGGCTGCTGCGCTGGG1460.1832881389976901No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTGAAAGTTG1380.17324495329918652No Hit
GCTGCGTTCTTCATCGATGCCAGTACCAAGTGCCTTACGGACACCACGAG1340.16822336044993472No Hit
GCTGCGTTCTTCATCGATGCCGCCTCCAGACGGAATCTGGAACTCACAGA1300.16320176760068295No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA1290.16194636938836998No Hit
CCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1290.16194636938836998No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG1290.16194636938836998No Hit
GCTGCGTTCTTCATCGATGCCGAAGGCGGCCGCACCGAATACCATTACGA1240.15566937832680527No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT1230.1544139801144923No Hit
GCTGCGTTCTTCATCGATGCGCACGGCGACCTTGACGCTGACCTTTTCGA1230.1544139801144923No Hit
GCTGCGTTCTTCATCGATGCACCAGGATCTGATCAAAAATCACCGTTTAA1170.14688159084061464No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1150.14437079441598874No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1150.14437079441598874No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1100.13809380335442403No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1090.13683840514211107No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGGT1070.13432760871748517No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT1050.1318168122928593No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCTAGGCCGGACGATCGGGCAAACT1050.1318168122928593No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA960.12051822838204278No Hit
GCTGCGTTCTTCATCGATGCGACGTAACACAAGGTCGATACCTTTTTCTC930.11675203374510396No Hit
GCTGCGTTCTTCATCGATGGCTTGTTTTGCCGCTGGCTTCGCTTGGGCTG920.115496635532791No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAAAACAGGAACAACACACACGTGT910.11424123732047807No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGACAAAATAAACTTC890.11173044089585217No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT830.1041980516219745No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)