FastQCFastQC Report
Sun 21 May 2023
EGAF00007832956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61768
Sequences flagged as poor quality0
Sequence length235-238
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1035416.762725035617148No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG943115.2684237793032No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT884814.324569356300998No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT36655.933493070845746No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC30394.9200233130423525No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT29784.821266675301127No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT25294.094353063074731No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG19693.187734749384795No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG15432.4980572464706645No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT12462.017225747960109No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT8561.3858308509260457No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT8451.3680222769071364No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG8231.3324051288693175No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGGGCTGCGTTCTTCATCGA4730.7657686828131071No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA4280.6929154254630229No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGCGCTGCGTTCTTCATCGA3860.6249190519362777No Hit
GCTGCGTTCTTCATCGATGGTTTGAACATACTTTTTGCACTTTGATAATT3550.5747312524284419No Hit
GCTGCGTTCTTCATCGATGCCCACCATCACCACCAAATCCTTTCGGCCCT3460.560160600958425No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG2870.4646418857660925No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT2650.4290247377282735No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGTGCTGCGTTCTTCATCGA2640.42740577645382727No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA2290.37074213184820615No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGAGCTGCGTTCTTCATCGA1910.3092216034192462No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1720.27846133920476623No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1720.27846133920476623No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC1580.2557958813625178No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1550.25093899753917887No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT1520.2460821137158399No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGGGCTGCGTTCTTCATCGG1520.2460821137158399No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1430.23151146224582309No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT1330.21532184950135994No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGAGTCGTTCTTAACTCTTGTG1310.21208392695246728No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1300.21046496567802098No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1190.19265639165911153No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT1180.1910374303846652No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA1170.1894184691102189No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA1090.17646677891464835No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA1090.17646677891464835No Hit
GCTGCGTTCTTCATCGATGCACTGATCTCGCAGATGAGCGAGCAGCCCAT980.1586582048957389No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA950.15380132107239994No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGCGCTGCGTTCTTCATCGG920.148944437249061No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG900.14570651470016835No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGTCAAACT860.13923066960238312No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT830.13437378577904416No Hit
GCTGCGTTCTTCATCGATGCAAGATCCGAGATATCCGTTGCCGAGAGTCG780.1262789794068126No Hit
GCTGCGTTCTTCATCGATGCAATGAGCGGAGAAACGACAATCGCCGTTCC770.12466001813236627No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGGT760.12304105685791995No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG740.11980313430902732No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCAAGAGTCG730.11818417303458102No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG720.1165652117601347No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG710.11494625048568839No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGCCGTCT690.11170832793679575No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGAGCTGCGTTCTTCATCGG670.10847040538790312No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG650.10523248283901049No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT640.10361352156456419No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATACGTTGCCAAGAGTCA630.10199456029011786No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA630.10199456029011786No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA630.10199456029011786No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGTGCTGCGTTCTTCATCGG620.10037559901567153No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTGG620.10037559901567153No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT620.10037559901567153No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)