FastQCFastQC Report
Sun 21 May 2023
EGAF00007832962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102498
Sequences flagged as poor quality0
Sequence length235-238
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT4233341.30129368377919No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG2522624.611211926086362No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT41864.0839821264805165No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG39573.860563132939179No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT37673.6751936623153627No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG15621.5239321742863277No Hit
GCTGCGTTCTTCATCGATGCACGATCCTTCCTCGCTGCAGGATCCTTCCT14961.4595406739643701No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC11331.1053874221936038No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA10531.0273371187730493No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT6640.6478175183906028No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT5980.5834260180686452No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT5100.49757068430603524No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT5000.48781439637846596No Hit
GCTGCGTTCTTCATCGATGCGCACACTACTCCCACCGCCCCCGAGTGCCT4830.4712287069015981No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT4750.46342367655954264No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG4370.4263497824347792No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4200.4097640929579114No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC3510.3424457062576831No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3500.34147007746492614No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3230.31512810006048897No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3230.31512810006048897No Hit
GCTGCGTTCTTCATCGATGCACGATCATTCCTGGTTGCACGATCCTTCCT3100.3024449257546489No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT2630.25659037249507305No Hit
GCTGCGTTCTTCATCGATGCAGGATCCTTCCTCGCTGCACGATCATTCCT2590.25268785732404536No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATTCGTTGCCGAGAGTCG2550.24878534215301762No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT2510.24488282698198988No Hit
GCTGCGTTCTTCATCGATGCAAGAGTCGAGATATCCGTTGCCGAGAGTCG2420.2361021678471775No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA2330.22732150871236512No Hit
GCTGCGTTCTTCATCGATGCAAGAGCTGAGATATCCGTTGCCGAGAGTCG1900.18536947062381706No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1840.17951569786727545No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAAAGTCG1800.17561318269624773No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1750.17073503873246307No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1740.16975940993970615No Hit
GCTGCGTTCTTCATCGATGCAAGATCCGAGATATCCGTTGCCGAGAGTCG1690.16488126597592148No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCT1620.15805186442662295No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT1610.15707623563386602No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGTCGAGAGTCG1570.1531737204628383No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1540.15024683408456752No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCTGAGAGTCG1480.14439306132802593No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG1360.13268551581494273No Hit
GCTGCGTTCTTCATCGATGCGGTCGCGGTCGGCGCAGTCCACTACGAAGA1330.12975862943667194No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1260.12292922788737341No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT1150.11219731116704715No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAGGCCGGACGATCGGGCAAACT1100.10731916720326251No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1090.10634353841050556No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCTGACGATCGGGCAAACT1080.10536790961774864No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCAAGATATCCGTTGCCGAGAGTCG1040.10146539444672092No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTTG1040.10146539444672092No Hit
GCTGCGTTCTTCATCGATGCCGGAGGAATCAGATCGCGCTGGGCGAGGTT1030.10048976565396397No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)