FastQCFastQC Report
Sun 21 May 2023
EGAF00007832964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145208
Sequences flagged as poor quality0
Sequence length236-238
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4832833.281912842267644No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2114014.558426532973389No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT130598.993306153930913No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT77335.325464161754173No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT71904.9515178227094925No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG62554.307613905569941No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT49853.4330064459258445No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT43132.970222026334637No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA34512.3765908214423446No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT31182.147264613519916No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACCATGTGTT16981.169357060217068No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT15211.0474629496997412No Hit
GCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCGTTGTTGCAGGTTG11960.8236460801057792No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG11050.76097735661947No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCATGTTTAATGGGTG10150.698997300424219No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT9210.6342625750647347No Hit
GCTGCGTTCTTCATCGATGCGGACATCTCCGTACTTCTCACGTGCCTGGT9030.6218665638256846No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTAAAAGTTG7830.5392264888986833No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG6520.4490110737700402No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCCAAAAGTTT6220.4283510550382899No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG5860.40355903256018955No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG5810.4001156961048978No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT5020.34571098011128865No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGTTT3660.25205222852735387No Hit
GCTGCGTTCTTCATCGATGCCCGAACCAAGAGATCCGTTGTTGAAAGTTT3350.23070354250454522No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGTTT3260.2245055368850201No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTGAAAGTTT3220.22175086772078675No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3160.21761886397443667No Hit
GCTGCGTTCTTCATCGATGTGGGAACCAAGAGATCCGTTGTTGAAAGTTT2820.19420417607845297No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC2690.1852515012946945No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGCCGAGAGTCG2460.16941215360035258No Hit
GCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTGAAAGTTT2420.16665748443611922No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2420.16665748443611922No Hit
GCTGCGTTCTTCATCGATGCTAGTGCCAAGAGATCCATTGTCAAAAGTTG2410.16596881714506087No Hit
GCTGCGTTCTTCATCGATGCAGTAAGACCGTAGCTGCGTTCTTCATCGAT2370.1632141479808275No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2300.1583934769434191No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCGTTGTTGAAAGTTT2070.14255412924907718No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTAG1800.12396011239050189No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTTG1680.11569610489780179No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1670.11500743760674342No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1660.11431877031568508No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1650.11363010302462674No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATACGTTGCCGAGAGTCG1630.11225276844251005No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCGAGATATCCGTTGCCGAGAGTCG1610.11087543386039338No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATTCGTTGCCGAGAGTCG1610.11087543386039338No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG1600.11018676656933502No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1590.10949809927827668No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGATAGTCG1580.10880943198721833No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)