FastQCFastQC Report
Sun 21 May 2023
EGAF00007832974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95383
Sequences flagged as poor quality0
Sequence length237-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1908620.009855005608966No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1315513.791765828292254No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGAT1099511.527211347934118No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG57496.0272794942495No Hit
GCTGCGTTCTTCATCGATGCATAGCTTAATTGCATCTGTAGGTCTCCTAT54575.721145277460344No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT42674.473543503559334No Hit
GCTGCGTTCTTCATCGATGCACTGATCTCGCAGATGAGCGAGCAGCCCAT40584.254426889487645No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGGC20762.176488472788652No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG14281.4971221286812115No Hit
GCTGCGTTCTTCATCGATGAGCTGTCGGTAAGCTGCGTTCTTCATCGATG14151.483492865604982No Hit
GCTGCGTTCTTCATCGATGCAATGAGCGGAGAAACGACAATCGCCGTTCC13931.4604279588605935No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT13361.4006688822955873No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC10851.1375192644391559No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAAGTCA10611.1123575479907322No Hit
GCTGCGTTCTTCATCGATGCGCTCCTCTGCAGTGAGGTGACGGATGTAGC6290.659446651919105No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC5820.6101716238742753No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG5680.5954939559460282No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAACACTGTAATGTCTTC5090.5336380696769865No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT4790.5021859241164568No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT4410.4623465397397859No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA4310.45186249121960936No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG4110.43089439417925623No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG4020.4214587505110974No Hit
GCTGCGTTCTTCATCGATGCGCTGTCGGTAAGCTGCGTTCTTCATCGATG3720.3900066049505677No Hit
GCTGCGTTCTTCATCGATGCGTCGGACAGCCACAATCAACGCACATGCGG3600.37742574672635587No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3560.37323212731828526No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT3530.37008691276223227No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG3520.36903850791021464No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC3130.32815071868152607No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT3090.32395709927345545No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCTGC2760.28935973915687285No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGCCGTCT2560.2683916421165197No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2390.2505687596322196No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT2210.2316974722959018No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT2160.2264554480358135No Hit
GCTGCGTTCTTCATCGATGAGCTGTCGGTAAGCTGCGTTCTTCATCGGCT2110.22121342377572523No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1880.1971001121793192No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1830.19185808791923087No Hit
GCTGCGTTCTTCATCGATCTGAAAGAGCTCGGGATGCGCCCAGGCATCCG1630.17088999087887777No Hit
GCTGCGTTCTTCATCGATGCGCAAGGATAAGAACACGCTTACCCCTGCGA1520.15935753750668358No Hit
GCTGCGTTCTTCATCGATGCCCGCTGGTCTTACCGCTCGATGCTCGGTGG1500.15726072780264827No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT1490.15621232295063062No Hit
GCTGCGTTCTTCATCGATGCAGACCGCCCGCCGCTTTTAAGACATCCAGA1470.1541155132465953No Hit
GCTGCGTTCTTCATCGATGCCGCCTCCAGACGGAATCTGGAACTCACAGA1470.1541155132465953No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1420.14887348898650704No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC1380.14467986957843643No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGATATCCGTTGTTAAGAGTTG1320.13838944046633048No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1180.12371177253808331No Hit
GCTGCGTTCTTCATCGATGCTCTTGATGCAGCATCCCTCAATCACCATAT1180.12371177253808331No Hit
GCTGCGTTCTTCATCGATGCCCTCTATCAGACGAATGGTAAAGGGGATAT1150.12056655798203034No Hit
GCTGCGTTCTTCATCGATGCTCGTGCGCCTTTCCGTTACGATGGGTCTCA1100.11532453372194205No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTTCCGAGAGTCG1060.11113091431387144No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1010.10588889005378316No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGTTG1000.10484048520176552No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT990.10379208034974785No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGATATATCCGTTGCCGAGAGTCG960.1006468657936949No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)