FastQCFastQC Report
Sun 21 May 2023
EGAF00007832980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76593
Sequences flagged as poor quality0
Sequence length235-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1612321.05022652200593No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1117714.592717350149492No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT789510.307730471453006No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG30213.9442246680506052No Hit
GCTGCGTTCTTCATCGATGCCCATACGAATGATCGGAAGGTGGAAAAGGG21202.767876960035512No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC17242.250858433538313No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT16922.2090791586698524No Hit
GCTGCGTTCTTCATCGATGCCGCCGATTCCGGAGAAGGCCTGCTCGGGGA15902.0759077200266343No Hit
GCTGCGTTCTTCATCGATGCAACACCGAAGACTATCCGCAGCTCGCACGT15342.0027939890068285No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT14631.9100962228924312No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT13441.7547295444753437No Hit
GCTGCGTTCTTCATCGATGCGCCCTGTCCTCCCATCTGATAGAACTGCGC12121.582390035642944No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG9581.2507670413745382No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG8671.1319572284673534No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT8091.0562322927682686No Hit
GCTGCGTTCTTCATCGATGCCTGCGGATGCAATTGCCTCGACACTCGGGT7180.937422479861084No Hit
GCTGCGTTCTTCATCGATGCGAGTACAAGAAGAGAAAACTTCCTAACATC5670.7402765265755357No Hit
GCTGCGTTCTTCATCGATGCGGGGGCTGCTACCGAAGTGTAGGCGAGCGG5550.724609298499863No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA4950.6462731581214994No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT4800.6266891230269084No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT4390.5731594271016933No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT4040.5274633452143147No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT3910.5104905147990025No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTCGTAGCATCAGCCGGGAAAGTCA3780.4935176843836904No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3610.4713224446098207No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG3390.4425991931377541No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3290.42954316974136014No Hit
GCTGCGTTCTTCATCGATGCCCTGTGGGTACTTGCCAGCCAAATGAAGAC2790.3642630527593906No Hit
GCTGCGTTCTTCATCGATGCCCAGCGTGAGCTGCATGATGATGAGCTTCT2420.315955766192733No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA2370.309427754494536No Hit
GCTGCGTTCTTCATCGATGCCATGAATCCCTGCAGATATCCAACCAGCTC2350.3068165498152573No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC2330.30420534513597847No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA2240.29245492407922397No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT2200.28723251472066635No Hit
GCTGCGTTCTTCATCGATGCCTTTCGCCGACAAACAGCTAACGTAGATAT2070.27025968430535424No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1950.2545924562296816No Hit
GCTGCGTTCTTCATCGATGCAGTGCTTGTCATCTACTACAAACAAATTTC1900.2480644445314846No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT1790.23370281879545127No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCGTCTTTTCTTCTTGTTT1750.2284804094368937No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT1630.212813181361221No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT1630.212813181361221No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1620.2115075790215816No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT1590.20759077200266343No Hit
GCTGCGTTCTTCATCGATGCCCTGGTCCCCGACGCACGCGCCTTTCGTCT1550.20236836264410585No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG1500.1958403509459089No Hit
GCTGCGTTCTTCATCGATCTGAAAGAGCTCGGGATGCGCCCAGGCATCCG1440.18800673690807254No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1430.18670113456843315No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1420.18539553222879374No Hit
GCTGCGTTCTTCATCGATGCAGTCCTTGTCATTTACTACAAACAAATTTC1400.18278432754951496No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT1270.16581149713420285No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT1250.16320029245492407No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT1230.1605890877756453No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT1180.15406107607744834No Hit
GCTGCGTTCTTCATCGATGCTTCGTCCCAAGATACGCTTGTTTACACGGG1160.15144987139816954No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1090.1423106550206938No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1090.1423106550206938No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1040.13578264332249684No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT930.12142101758646352No Hit
GCTGCGTTCTTCATCGATGCCAAAGCCTGGGCTAGCATTCACTTCCAGCA920.12011541524682412No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC890.11619860822790595No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCTGACGATCGGGCAAACT890.11619860822790595No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT830.10836499419006958No Hit
GCTGCGTTCTTCATCGATGCGTGTGATGCGCGTGATGTGGTCGGTGTGGT820.1070593918504302No Hit
GCTGCGTTCTTCATCGATGCGTCCGATGAAGCGGATGCGCACATTTTTCT810.1057537895107908No Hit
GCTGCGTTCTTCATCGATGCTTGGAAACAGGTTGCTGAACGAACGACTTT810.1057537895107908No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)