FastQCFastQC Report
Sun 21 May 2023
EGAF00007833000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences174916
Sequences flagged as poor quality0
Sequence length235-238
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA8227147.03457659676645No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3917822.39817969768346No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA54553.1186398042488968No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT37972.1707562487136682No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG35372.0221134716092295No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT31441.797434196985982No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT30511.744265819021702No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCACAAATCAAAATAA29011.6585103706922182No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT23751.3577945985501612No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG18701.0690845891742322No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC16140.9227286240252464No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT14030.8020992933751059No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT13540.7740858469208076No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC6470.3698918337945071No Hit
TCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA6290.35960117999496904No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT6060.34645201125111486No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT5120.2927119302979716No Hit
GCTGCGTTCTTCATCGATGACAGTCTCGACTATCTCGAGCGAATCGACGA4990.2852797914427497No Hit
GCTGCGTTCTTCATCGAAACGCCGTCCTTTTAAGAATTTCAATTTCTTTC4740.270987216721169No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA4460.2549795330329987No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA4440.25383612705527225No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT4030.23039630451187998No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC3960.2263943835898374No Hit
GCTGCGTTCTTCATCGATGCAATGAGCGGAGAAACGACAATCGCCGTCCC3940.22525097761211094No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA3460.1978092341466761No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3280.18751858034713806No Hit
GCTGCGTTCTTCATCGATGCAATGAGCGGAGAAACGACAATCGCCGTTCC3000.17151089665896774No Hit
GCTGCGTTCTTCATCGATGCCCTTCTTTCTGCCCGCTTTCTTATTCGGGT2910.1663655697591987No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGACAAAATAAACTTC2240.12806146950536257No Hit
TCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT2100.12005762766127742No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGCCGTCT2040.11662740972809806No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT2020.11548400375037161No Hit
GATGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1900.1086235678840129No Hit
GCTGCGTTCTTCATCGATGCTGCCAAAATCGGCAGGGAGCTGGGCTGGAA1880.10748016190628645No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA1760.10061972603992773No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)