FastQCFastQC Report
Sun 21 May 2023
EGAF00007833002

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833002
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136896
Sequences flagged as poor quality0
Sequence length237-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGAT1873613.686302010285182No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1532711.1960904628331No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT113988.326028517999065No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA99217.24710729312763No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG75185.491760168302946No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG72465.293069191210846No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT69915.106796400187004No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT65794.805838008415147No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT47253.451525245441795No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG43383.1688288920056102No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG40912.988399953249182No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGGC36442.6618747078073866No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT36122.638499298737728No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT27131.9817964001870032No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT22881.6713417484805986No Hit
GCTGCGTTCTTCATCGATGCGAGAACCGAGAGATCCATTGTTGAAAGTTG14411.052623889668069No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA14081.0285179990649838No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA11680.8532024310425432No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG11550.8437061711079944No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGCC9640.7041841982234689No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG8090.5909595605423095No Hit
GCTGCGTTCTTCATCGATGGGTCCAAGGTCTGCTGCGTTCTTCATCGATG6340.46312529219261334No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCTGC5670.41418302945301544No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT4970.363049322113137No Hit
GCTGCGTTCTTCATCGATGGTCCAAGGTCTGCTGCGTTCTTCATCGATGG4820.35209209911173445No Hit
GCTGCGTTCTTCATCGATGTCCCCCTCTGCCTGCTGCGTCTTCTCCACCT4740.34624824684431976No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT4250.3104546517064049No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT4040.29511453950444133No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGTTT3800.27758298270219733No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3400.24836372136512389No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC3250.23740649836372138No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTGAAAGTTG2930.21403108929406262No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG2900.2118396446937821No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT2800.2045348293595138No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2740.2001519401589528No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2650.19357760635811128No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG2640.1928471248246844No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGAGATCCGTTGTTGAAAGTTG2610.19065568022440393No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCCTT2560.18700327255726976No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1960.14317438055165965No Hit
GCTGCGTTCTTCATCGATGCCATGAACCGTTTGCGCTACGACGACAGGCT1940.14171341748480598No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCTCC1880.13733052828424497No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT1860.1358695652173913No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1840.13440860215053765No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGTTG1810.13221715755025715No Hit
GCTGCGTTCTTCATCGATGTCCCCCGCTCTGCTGCGTCTTCTCCACCTCG1690.1234513791491351No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGTCAAACT1660.1212599345488546No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1550.11322463768115942No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTA1470.10738078541374474No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCTTT1460.1066503038803179No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA1430.10445885928003741No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA1410.10299789621318373No Hit
GCTGCGTTCTTCATCGATGTGGTCCAAGGTCTGCTGCGTTCTTCATCGAT1400.1022674146797569No Hit
GCTGCGTTCTTCATCGATGCAGGAGTTGGATAGCAAGGAGTTGGGTGTGT1390.10153693314633006No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)