FastQCFastQC Report
Sun 21 May 2023
EGAF00007833014

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833014
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75882
Sequences flagged as poor quality0
Sequence length235-238
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT4188755.200179225639815No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG906111.940908252286444No Hit
GCTGCGTTCTTCATCGATGCAAGTGCACGTAAGCTGCGTTCTTCATCGAT23113.045518041169184No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT15512.043962995176722No Hit
GCTGCGTTCTTCATCGATGCGAGGTTGTTGAATGCGCGAGCGTCAGAAGG14261.8792335468226986No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT13721.8080704251337603No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA13701.805434753960096No Hit
GCTGCGTTCTTCATCGATGAAGTGCACGTAAGCTGCGTTCTTCATCGATG12791.685511715558367No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT9391.2374476160354233No Hit
GCTGCGTTCTTCATCGACCCACGAGCCAAGTGATCCACCGTTCAGGGTAA5250.691863683086898No Hit
GCTGCGTTCTTCATCGATGCAAGTGCACGTAAGCTGCGTTCTTCATCGGC4570.6022508631823094No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT4470.5890725073139874No Hit
GCTGCGTTCTTCATCGATGCCCATGTTCATCCGTTGCGTCTGTTGGATAA4170.5495374397090219No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4060.5350412482538679No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT3760.49550618064890223No Hit
GCTGCGTTCTTCATCGATGCGACTATGGTAAGACGTAGGAACAGTTTGGC3720.49023483830157344No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA3700.48759916712790907No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT3510.4625602909780976No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT3360.4427927571756147No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3170.41775388102580324No Hit
GCTGCGTTCTTCATCGATGAAGTGCACGTAAGCTGCGTTCTTCATCGGCT3010.39666851163648825No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT2600.34263725257636857No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG2580.3400015814027042No Hit
GCTGCGTTCTTCATCGATGCTTGCCCAGTGCATCTGACCGCTGACGAACA2550.33604807464220765No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT2510.3307767322948789No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA2460.32418755436071794No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2000.26356711736643734No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT1850.24379958356395454No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT1720.22666772093513612No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG1680.22139637858780736No Hit
GCTGCGTTCTTCATCGATGCAGTGCACGTAAGCTGCGTTCTTCATCGATG1670.2200785430009752No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT1500.19767533802482803No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCTGACGATCGGGCAAACT1490.19635750243799585No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT1440.1897683245038349No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1420.18713265333017054No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1390.183179146569674No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT1250.16472944835402337No Hit
TCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1220.1607759415935268No Hit
GCTGCGTTCTTCATCGATGCAAGGGATGAAGCTCTCTTTTTGTCTCTTTC1220.1607759415935268No Hit
GCTGCGTTCTTCATCGATGGGAGAACCTAGAGATCCGTTGTCGAAAGTTG1180.15550459924619803No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTGCGCT1180.15550459924619803No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC1180.15550459924619803No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAGGCCGGACGATCGGGCAAACT1120.14759758572520493No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCATAGCCAAGTAGCAG1120.14759758572520493No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGACAAACT1090.14364407896470835No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1030.13573706544371525No Hit
GCTGCGTTCTTCATCGATGCTTCCACCGCTTTCGAGACCTGTAACGACAC1000.13178355868321867No Hit
GCTGCGTTCTTCATCGATATCGAGGATAGAGAGAGGAGCTTCTAAAGAGG880.11596953164123244No Hit
GCTGCGTTCTTCATCGACTCGAAACGCCTAGGCATCCACCGTATGCCCTT870.11465169605440026No Hit
GCTGCGTTCTTCATCGATCTGCTCTCGTTCGACCATGAAGTGGCAGTGTT850.11201602488073589No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)