FastQCFastQC Report
Sun 21 May 2023
EGAF00007833027

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833027
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences175688
Sequences flagged as poor quality0
Sequence length247-250
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA6621437.68840216747871No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC5908733.631779062884206No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC123017.001616501980784No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG26051.4827421337826145No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC24561.397932698875279No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC15970.9089977687719137No Hit
GGAAGTAAAAGTCGTAACAAGGCGTAGAGGAATTAGCGCAGAATCAGAAA15900.905013432903784No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTGTTGAAAAAGCTGGTAATTGTCAT14230.8099585629069714No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC12850.7314102272209826No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCCAGTGCTTG11600.6602613724329494No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC9280.5282090979463594No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG6760.38477300669368425No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC5370.30565548016939115No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG4450.25328992304539866No Hit
GGAAGTAAAAGTCGTAACAAGGCAACGACGAGCACGATGCCGAGGATTTT4330.24645963298574747No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGAGGAAGGATC4130.23507581621966211No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA3870.22027685442375117No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTCAC3830.2180000910705341No Hit
GGAAGTAAAAGTCGTAACAAGGGGAAGTAGACCTGGCCCTCTTCCAGGGC3750.21344656436409998No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACATCTCCGGCA3250.18498702244888668No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGAA3200.18214106825736534No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC3120.1775875415509312No Hit
GGAAGTAAAAGTCGTAACAAGGTTGGCGGGATTTACACAGTTCTTTCGAC3090.17587996903601838No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAGATCCAGTCGAGCATCTCTCGACG2900.16506534310823734No Hit
GGAAGTAAAAGTCGTAACAAGGATATGAAGATTGTCAATATGATGCAGAC2820.1605118164018032No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCTTAGGTGAACCTGCGGAAGGATC2740.15595828969536907No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACAACTCTCCGGCA2640.1502663813123264No Hit
GGAAGTAAAAGTCGTAACAAGGGAACTGGAAGTTGACGAGCATCGCATCT2630.14969719047402213No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT2550.145143663767588No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGAAACCTCTCCGGCA2460.1400209462228496No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACATCTCTCCGGCA2420.13774418286963255No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTTCGGAAGGATC2320.13205227448658985No Hit
GGAAGTAAAAGTCGTAACAAGGTGCAGCAATGTTATAACCGCGATTGGAT2220.1263603661035472No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAACCAACATGACTGATGAAGAAAAA2180.12408360275033012No Hit
GGAAGTAAAAGTCGTAACAAGGCTGTAGGTACCGACCTCACCGTTGATGA2160.12294522107372159No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC2070.1178225035289832No Hit
GGAAGTAAAAGTCGTAACAAGGTGGTAGAAGGGTTGCGCGTGGCCAAAGA2010.1144073584991576No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGTAAGGATC1980.1126997859842448No Hit
GGAAGTAAAAGTCGTAACAAGGCTCGATGCAGATGAAGAACGCAGCCAGT1910.10871545011611494No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTGAATGAGGCTTTTGCCGAGTTTAA1790.10188516005646374No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1780.10131596921815947No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)