FastQCFastQC Report
Sun 21 May 2023
EGAF00007833028

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833028
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences175688
Sequences flagged as poor quality0
Sequence length235-238
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT5895133.55436910887482No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4466125.42063202950685No Hit
GCTGCGTTCTTCATCGATGCAGGCAAGCACTGGCTGCGTTCTTCATCGAT2280912.98267383088202No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT79814.542712080506353No Hit
GCTGCGTTCTTCATCGATGCAGGCAAGCACTGGCTGCGTTCTTCATCGGC49932.841969855653203No Hit
GCTGCGTTCTTCATCGATGAGGCAAGCACTGGCTGCGTTCTTCATCGATG34121.942079140294158No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT26061.4833113246209189No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT20821.1850553253494833No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCTGGGAAGGTCA11040.6283866854879104No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA8370.4764127316606712No Hit
GCTGCGTTCTTCATCGATGAGGCAAGCACTGGCTGCGTTCTTCATCGGCT7820.44510723555393655No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT7410.42177041118346165No Hit
GCTGCGTTCTTCATCGATGCAGGCAAGCACTGGCTGCGTTCTTCATCTGC6490.36940485405946905No Hit
GCTGCGTTCTTCATCGATGCGGCAAGCACTGGCTGCGTTCTTCATCGATG6360.3620053731615136No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA6340.3608669914849051No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG5610.31931606028869364No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT4990.28402622831382907No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT4600.2618277856199626No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAGTTCACTGCTGCCG4000.22767633532170664No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT3760.21401575520240426No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCTGACGATCGGGCAAACT3420.19466326670005918No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3100.17644915987432266No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCGAGATATCCGTTGCCGAGAGTCG3070.17474158735940987No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT2900.16506534310823734No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT2730.15538909885706478No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGATAGTCG2710.15425071718045627No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTAG2620.14912799963571788No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT2430.13831337370793678No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2100.11953007604389598No Hit
GCTGCGTTCTTCATCGAGGTAGTGTCGTGCTTCGGGAGGTTTTCCCACAC2020.11497654933746186No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA2010.1144073584991576No Hit
GCTGCGTTCTTCATCGATGCGACTATGGTAAGGCGCAGAAACAGTTTGGC1980.1126997859842448No Hit
GCTGCGTTCTTCATCGATGCGATAGCCGAGATATCCGTTGCCGAGAGTCG1940.11042302263102773No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT1910.10871545011611494No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT1890.1075770684395064No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG1880.10700787760120213No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)