FastQCFastQC Report
Sun 21 May 2023
EGAF00007833030

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833030
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67145
Sequences flagged as poor quality0
Sequence length235-238
%GC60

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3361150.05733859557674No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT752311.204110507111476No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT40906.091294958671532No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT33504.989202472261524No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT29744.429220344031574No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG13301.980787847196366No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT10741.5995234194653363No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA10141.510164569215876No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA8151.2137910492218333No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCATGTTTAATGGGTG7561.1259215131431977No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT6650.990393923598183No Hit
GCTGCGTTCTTCATCGATGCCTGCGGATGCAATTGCCTCGACACTCGGAA5490.8176334797825601No Hit
GCTGCGTTCTTCATCGATGAAGTGAGAGAAATTTGTTCTTGTCCGAGGTG4930.7342318862163973No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT3320.4944523047136794No Hit
GCTGCGTTCTTCATCGATGCGAGAGCAGAGATATCCGTTGCCGAGAGTCG2370.3529674584853675No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA2210.3291384317521781No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT1960.29190557748156976No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1800.2680765507483804No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT1760.26211929406508305No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1750.2606299798942587No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT1670.24871546652766402No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACCGTGATGTCTTC1600.23829026733189368No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1530.2278650681361233No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT1500.2233971256236503No Hit
GCTGCGTTCTTCATCGATGCCTCTTCCGCCGAGAACCTGGGAGAGGTTTT1410.2099932980862313No Hit
GCTGCGTTCTTCATCGACTCGAAACGCCAAGGCATCCACCGTATGCCCTT1390.2070146697445826No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1380.20552535557375826No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG1330.19807878471963658No Hit
GCTGCGTTCTTCATCGATGCCTTTCGCCGACAAACAACTAACGTAGATAT1250.18616427135304192No Hit
GCTGCGTTCTTCATCGATGCGGACGGCGCTCAGTTCGTTGCTGCGCACAT1230.18318564301139326No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1080.16084593044902823No Hit
GCTGCGTTCTTCATCGATGCGAGATCCGAGATATCCGTTGCCGAGAGTCG1050.15637798793655522No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1020.1519100454240822No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT990.1474421029116092No Hit
GCTGCGTTCTTCATCGATGAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT970.14446347456996053No Hit
GCTGCGTTCTTCATCGATGCCATGAATCCCTGCAGATATCCAACCAGCTC970.14446347456996053No Hit
GCTGCGTTCTTCATCGATTGATTTAACACCTGGAGTTTCCACGCGAGTCA910.1355275895450145No Hit
GCTGCGTTCTTCATCGATGCTCTTGCCGAGCGCCACGGCGTCTCGTACTG890.13254896120336584No Hit
TCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG840.12510239034924417No Hit
GCTGCGTTCTTCATCGATGCCAGTACCAAGTGCCTTACGGACACCACGAG820.1221237620075955No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGATTCG800.11914513366594684No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT780.11616650532429815No Hit
GCTGCGTTCTTCATCGATGCTGTGCTTAACAGCAAAGTGGAGAATAAGGA760.11318787698264948No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCAGTTGCCGAGAGTCG740.11020924864100082No Hit
GCTGCGTTCTTCATCGATGCCTGCTGATGCAATTGCCTCGACACTCGGAA710.10574130612852782No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAATCGTACTCCACAACAGG700.10425199195770347No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)