FastQCFastQC Report
Sun 21 May 2023
EGAF00007833044

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833044
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73878
Sequences flagged as poor quality0
Sequence length235-238
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1825324.706949294783293No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1471519.917972874198004No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT1391218.83104577817483No Hit
GCTGCGTTCTTCATCGATGCGACTATGGTAAGGCGCAGAAACAGTTTGGC33074.4762987628251985No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG22833.090229838382198No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT14601.9762310836784969No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT14491.961341671404207No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG14081.9058447711091258No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT13561.8354584585397546No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA11221.5187200519775848No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT8291.1221202523078588No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG5790.7837245188012669No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT4690.6348303960583666No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT4140.5603833346869163No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA4070.5509082541487317No Hit
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCACCCTGACCAT3340.4520966999648069No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3260.4412680364925959No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA3030.4101356290099894No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3000.4060748802079103No Hit
GCTGCGTTCTTCATCGATGCGGATTATCGGGGAGAAATCGGCGTAATCTT2580.34922439697880286No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT2460.33298140177048646No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA2450.3316278188364601No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT2420.327567070034381No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT2400.32485990416632826No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2380.32215273829827556No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT2350.31809198949619644No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG1980.26800942093722085No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT1940.26259508920111535No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT1820.24635209399279895No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGTGCAAACT1750.23687701345461437No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT1750.23687701345461437No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA1560.21115893770811336No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1480.20033027423590244No Hit
GCTGCGTTCTTCATCGATGCCAATACGGTAGCGACGACGCTGCACATTTG1400.18950161076369149No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1150.1556620374130323No Hit
GCTGCGTTCTTCATCGATGCGAGGTTGTTGAATGCGCGAGCGTCAGAAGG1090.1475405398088741No Hit
GCTGCGTTCTTCATCGATGCGGTCGCGGTCGGCGCAGTCCACTACGAAGA1050.14212620807276863No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1040.14077262513874225No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG1020.1380654592706895No Hit
GCTGCGTTCTTCATCGATGCGACGTTCTAAGGTTGTATCGCGCTCCTGAG960.1299439616665313No Hit
GCTGCGTTCTTCATCGATGCCCAGCGTGAGCTGCATGATGATGAGCTTCT880.11911529819432036No Hit
GCTGCGTTCTTCATCGATGTGCCTGCCACGGCTACGATGTTGTAGCCCCG850.11505454939224127No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG800.10828663472210942No Hit
GCTGCGTTCTTCATCGATGCCCTCGTGCGAATCGATGTAGCGGTTATAGG790.10693305178808304No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC780.10557946885405668No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)