FastQCFastQC Report
Sun 21 May 2023
EGAF00007833048

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833048
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66313
Sequences flagged as poor quality0
Sequence length235-238
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2110831.830862726765492No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT47597.176571712937132No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT36055.436339782546408No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG31974.821075807156968No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA21423.230135870794565No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT17692.6676518932939244No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTGGCTGCGTTCTTCATCGA17452.6314598947416044No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT15302.3072399077104033No Hit
GCTGCGTTCTTCATCGATGAAGAGCTGTTTGCGACTCTCGCCACTCATCG9731.4672839413086423No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTGGCTGCGTTCTTCATCGATG9581.4446639422134424No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTCGCTGCGTTCTTCATCGA8661.305927947762882No Hit
GCTGCGTTCTTCATCGATGCGCCTTGAGGTTGTCCATCGTCATCATGGCA8061.215447951382082No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTGGCTGCGTTCTTCATCGG7371.1113959555441617No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT7111.0721879571124817No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTTGCTGCGTTCTTCATCGA6861.0344879586204816No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT6600.9952799601888015No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTAGCTGCGTTCTTCATCGA6110.9213879631444815No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC5410.8158279673668812No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTCGCTGCGTTCTTCATCGG4340.654471973821121No Hit
GCTGCGTTCTTCATCGATGCAGAGCATACCGTTGTCACCGTTCCTCCGGC4140.624311975027521No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3790.571531977138721No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTCGCTGCGTTCTTCATCGATG3770.5685159772593609No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTTGCTGCGTTCTTCATCGG3770.5685159772593609No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG3510.5293079788276809No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT3500.5277999788880008No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA3430.5172439793102408No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTTGCTGCGTTCTTCATCGATG3420.5157359793705608No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTAGCTGCGTTCTTCATCGG3320.5006559799737609No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT3260.49160798033568076No Hit
GCTGCGTTCTTCATCGATGCCTGGGTTCCCGTCAACACCAGGAACATCGC3240.48859198045632074No Hit
GCTGCGTTCTTCATCGATGGCAAAGGTCACTGGCTGCGTTCTTCATCGAT3190.48105198075792077No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGTTT2980.44938398202464075No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT2750.41469998341200065No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT2740.41319198347232067No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTGGCTGCGTTCTTCATCGGCT2700.4071599837136007No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA2440.3679519852819206No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA2370.3573959857041606No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTAGCTGCGTTCTTCATCGATG2290.34533198618672056No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2220.3347759866089606No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2140.3227119870915205No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1980.29858398805664044No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG1900.28651998853920047No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1850.27897998884080044No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1810.2729479890820804No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTTGCTGCGTTCTTCATCGGCT1750.2638999894440004No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1680.2533439898662404No Hit
GCTGCGTTCTTCATCGATGCCCATTTGCTATCAGATGCCTTCCCCTTTCT1560.2352479905900804No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1550.23373999065040038No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTAGCTGCGTTCTTCATCGGCT1520.22921599083136038No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1500.22619999095200038No Hit
GCTGCGTTCTTCATCGATGCGTTTTTCTTCCTCTTGGCGGAATTGAGCAG1460.22016799119328034No Hit
GCTGCGTTCTTCATCGATGCAAAGGTCACTCGCTGCGTTCTTCATCGGCT1450.21865999125360033No Hit
GCTGCGTTCTTCATCGATGGCAAAGGTCACTCGCTGCGTTCTTCATCGAT1400.21111999155520034No Hit
GCTGCGTTCTTCATCGATGCGCAAAGGTCACTGGCTGCGTTCTTCATCGC1340.20207199191712033No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1310.19754799209808033No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGGAAGTTT1140.17191199312352026No Hit
GCTGCGTTCTTCATCGATGTGAGAGCCGAGATATCCGTTGCCGAGAGTCG1090.16437199342512027No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG1090.16437199342512027No Hit
GCTGCGTTCTTCATCGATGCCGAATTCTTCGGCGTAGGCAAGGATGGGCA1050.15833999366640025No Hit
GCTGCGTTCTTCATCGATGGCAAAGGTCACTTGCTGCGTTCTTCATCGAT1030.15532399378704026No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1000.15079999396800023No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCG960.14476799420928024No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT950.14325999426960023No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT940.14175199432992022No Hit
GCTGCGTTCTTCATCGATGCGGTCCAAGGTCTGCTGCGTTCTTCATCGAT930.14024399439024024No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT900.1357199945712002No Hit
GCTGCGTTCTTCATCGATGGCAAAGGTCACTGGCTGCGTTCTTCATCGGC850.1281799948728002No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTTG820.1236559950537602No Hit
GCTGCGTTCTTCATCGATGCTTGGGAATAGGTTGCTGAACGAACGACTTT780.1176239952950402No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT780.1176239952950402No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT770.11611599535536019No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGATAGTCG740.11159199553632017No Hit
GCTGCGTTCTTCATCGATGCCTTGTCGGAGCCGTCCATGCCGCTTCCCAC730.11008399559664017No Hit
GCTGCGTTCTTCATCGATGGCAAAGGTCACTAGCTGCGTTCTTCATCGAT700.10555999577760017No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)