FastQCFastQC Report
Sun 21 May 2023
EGAF00007833054

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833054
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107867
Sequences flagged as poor quality0
Sequence length235-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT4536442.05549426608694No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT1079210.00491345824024No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT103349.58031650087608No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT86368.006155728814187No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTGCGAT31722.9406584034041923No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA15641.4499337146671363No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG13311.233926965615063No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT10911.0114307434155023No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC10410.965077363790594No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCGAT9740.9029638350932166No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT8990.8334337656558539No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAAC8160.7564871554785059No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT6670.6183540841962787No Hit
GCTGCGTTCTTCATCGCAGCTTCGACAGTGAAGCAGTTCAGGTCGACAAT5880.5451157443889234No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT5750.5330638656864473No Hit
GCTGCGTTCTTCATCGATGCGATCTTGTTAAATTAAGGAGAATGTAGATT5490.5089601082814947No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG5400.5006164999490113No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG5310.49227289161652776No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT5190.4811480805065498No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT4260.39493079440422No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT4200.389368388849231No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA4170.3865871860717365No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC3860.35784809070429324No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT3110.28831802126693057No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT2870.26606839904697455No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG2690.24938118238200746No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA2550.2364022360870331No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT2530.23454810090203676No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT2320.21507968145957523No Hit
GCTGCGTTCTTCATCGATGAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT2190.203027802757099No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCGGC2180.20210073516460084No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT1980.18355938331463748No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT1870.17336163979715763No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT1840.1705804370196631No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT1760.16316389627967776No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG1750.16223682868717956No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1730.16038269350218323No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCTGACGATCGGGCAAACT1730.16038269350218323No Hit
GCTGCGTTCTTCATCGATGCCCGGCTTCCTTTTTCTCTTTATCGAAAAAA1720.15945562590968507No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT1670.15482028794719424No Hit
GCTGCGTTCTTCATCGATGGTCCGTACCTTGGCTGCGTTCTTCATCGATG1600.14833081479970706No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1590.14740374720720886No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1450.13442480091223452No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT1410.13071653054224183No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT1360.126081192579751No Hit
GCTGCGTTCTTCATCGATTCCGCTTCCGAGGCCGGACGATCGGGCAAACT1330.12329998980225648No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTTGCGCATCTGCG1320.12237292220975832No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT1310.12144585461726014No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAGGCCGGACGATCGGGCAAACT1310.12144585461726014No Hit
GCTGCGTTCTTCATCGATGCTGGCTCCAGGGAGCTTCTTGATGAGGTCAG1300.12051878702476197No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGACAAACT1220.11310224628477662No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1200.11124811109978028No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCTC1150.10661277313728944No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)