FastQCFastQC Report
Sun 21 May 2023
EGAF00007833059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72055
Sequences flagged as poor quality0
Sequence length247-250
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC3660650.80285892720838No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1468820.38442856151551No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA56537.845395878148636No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC32584.521546041218514No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTTAAGGTTTCGGATAAAGCA23663.283602803414059No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC7641.0603011588369995No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC7000.9714801193532718No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC4850.6730969398376241No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC3600.4996183470959684No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC3530.4899035459024356No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG2620.36361113038651033No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC2400.3330788980639789No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA1800.2498091735479842No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT1730.24009437235445147No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA1650.22899174241898548No Hit
GGAAGTAAAAGTCGTAACAAGGATAAAACCCAAAATAAGCCGGCAGTTGT1650.22899174241898548No Hit
GGAAGTAAAAGTCGTAACAAGGTGGGTGATGTGGTCTACTCCCAGGCCGG1450.2012351675803206No Hit
GGAAGTAAAAGTCGTAACAAGGATAATGCATTCAAGACATCCAGCCGATA1190.1651516202900562No Hit
GGAAGTAAAAGTCGTAACAAGGGCCATGTCGGTGGCGTTTTTGCCTTTGG1080.1498855041287905No Hit
GGAAGTAAAAGTCGTAACAAGGTCGTCGGCGGCGTGATTCCGAAGGAATT920.1276802442578586No Hit
GGAAGTAAAAGTCGTAACAAGCGGTAAGAAGAATACAATCAACACTTGAC900.1249045867739921No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC840.11657761432239261No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC770.1068628131288599No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)