FastQCFastQC Report
Sun 21 May 2023
EGAF00007833069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77550
Sequences flagged as poor quality0
Sequence length247-250
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1697021.88265635074146No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1504519.400386847195357No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG1250216.12121212121212No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTTAAGGTTTCGGATAAAGCA1160514.964539007092197No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA73939.533204384268213No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC29643.8220502901353965No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG10361.3359123146357188No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA6960.897485493230174No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG6340.8175370728562219No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC5240.6756931012250161No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGGGACGGCGGAAAATG3890.501611863313991No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCGAATCTAACAATGAAGAATCAG3770.4861379754996776No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC3120.402321083172147No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC2880.3713733075435203No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTACCGGAAGGTGCGGCTGGATC2250.2901353965183753No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC2050.26434558349451964No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT2030.2617666021921341No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC1850.23855577047066412No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCAGGGCTTCGACCTTCATGCCGCGT1610.2076079948420374No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC1550.19987105093488075No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG1260.16247582205029013No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCTAGACGCAGCACGCGCAAGTCGT1130.14571244358478402No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT1060.13668600902643457No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC1050.13539651837524178No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC1040.134107027724049No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT1030.13281753707285623No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGTCTGGATC940.12121212121212122No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGGCATGAAACTCACTGAAAGCTAC940.12121212121212122No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCTGCTGGATC890.11476466795615732No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGTTGCGGCTGGATC880.11347517730496454No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC850.1096067053513862No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)