FastQCFastQC Report
Sun 21 May 2023
EGAF00007833088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142649
Sequences flagged as poor quality0
Sequence length236-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4948634.69074441461209No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2077814.565822403241524No Hit
GCTGCGTTCTTCATCGATGCGGATGTAGGAGCCGTCGGGACGACGAACTT80005.608171105300422No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG64594.527897146141928No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT63714.466207263983624No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT44813.1412768403563995No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT35392.4809146927072745No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG30662.149331576106387No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG26931.8878505983217548No Hit
GCTGCGTTCTTCATCGATGCCTATCAAGGACGCTGCGTTCTTCATCGATG18501.2968895681007226No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA17831.2499211350938317No Hit
GCTGCGTTCTTCATCGATGCCCTATCAAGGACGCTGCGTTCTTCATCGAT16691.1700046968433007No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG16641.166499589902488No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA14481.0150789700593765No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA11460.8033705108342856No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACAATGTGTT10950.7676184200379954No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC10400.729062243689055No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGTGCA10030.7031244523270406No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT9110.6386304846160856No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC8070.5657242602471801No Hit
GCTGCGTTCTTCATCGATGCTGTCCGATGTTACGGTAGTGGGCGTCTTCA7660.5369823833325155No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG7430.5208588914047767No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG7010.49141599310194956No Hit
GCTGCGTTCTTCATCGATGCAACTGTCGAAAAAATCAAACGGAGAGAATT6910.484405779220324No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA6730.4717873942333981No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT6580.46127207341095977No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA6280.4402414317660832No Hit
GCTGCGTTCTTCATCGATGCTGTCTGCGTAATCGTGGATTGTCTTATGAC6070.42551998261466956No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT6060.42481896122650703No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT6050.42411793983834445No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG5380.37714950683145343No Hit
GCTGCGTTCTTCATCGATGCGAGAGACAAGAGATCCGTTGTTGAAAGTTG5220.36593316462085257No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA4840.3392943518706756No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGATATATCCGTTGCCGAGAGTCG4830.338593330482513No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT4720.33088209521272494No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCTGAGAGTCG4560.3196657530021241No Hit
GCTGCGTTCTTCATCGATGTCGATGAAGGAGTCATAGCGCTCGGAGTGCA4130.28952183331113435No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT4050.28391366220583386No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3890.27269731999523306No Hit
GCTGCGTTCTTCATCGATGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA3870.27129527721890795No Hit
GCTGCGTTCTTCATCGATGCACGTAGGAACGCGGTCCCGTACAGGGGTCC3370.2362442078107803No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCTGAGAGTCA3070.21521356616590373No Hit
GCTGCGTTCTTCATCGATGCCCTATCAAGGACGCTGCGTTCTTCATCGGC2880.2018941597908152No Hit
GCTGCGTTCTTCATCGATGCCATCTTCGTGTCCTATGCCGCCAGCCTCGT2740.19207986035653948No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT2710.18997679619205182No Hit
GCTGCGTTCTTCATCGATGCGAATGTAGGAGCCGTCGGGACGACGAACTT2390.16754411177085013No Hit
GCTGCGTTCTTCATCGATGCCTATCAAGGACGCTGCGTTCTTCATCGGCT2310.16193594066554973No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT2200.1542247053957616No Hit
GCTGCGTTCTTCATCGATGCTCGAATTTTCGTGTGAGTTGCCGATATTGG1970.1381012134680229No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTGGTCATTTACTACAAACAAATTTC1960.13740019207986034No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTA1820.12758589264558462No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1750.12267874292844674No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1700.11917363598763397No Hit
GCTGCGTTCTTCATCGATGCCGACGCCGAGGCGTTCAACCACCAGGTTCC1680.11777159321130887No Hit
GCTGCGTTCTTCATCGATGCCGCCAAAATCGGCAGGGAACTGGGCTGGAA1660.11636955043498377No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA1580.11076137932968336No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG1530.10725627238887059No Hit
GCTGCGTTCTTCATCGATGCTGCCAAAATCGGCAGGGAGCTGGGCTGGAA1430.10024605850724505No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)