FastQCFastQC Report
Sun 21 May 2023
EGAF00007833092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113997
Sequences flagged as poor quality0
Sequence length235-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT4960243.51167135977263No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1417212.431906102792178No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT84367.400194741966894No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG48104.219409282700422No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG28362.487784766265779No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG27442.4070808880935464No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT18891.657061150732037No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT18331.6079370509750255No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT16241.4245988929533233No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA14701.2895076186215426No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT11501.0087984771529075No Hit
GCTGCGTTCTTCATCGACGTGGTAGATTCGACTTTGCCCAAGGAATTTTC10490.9201996543768696No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT8990.7886172443134468No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG8820.7737045711729256No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT8730.7658096265691202No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT8530.7482653052273305No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT7850.6886146126652456No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG7330.6429993771765924No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT6710.5886119810170444No Hit
GCTGCGTTCTTCATCGAGGTAGTGTCGTGCTTCGGGAGGTTTTCCCACAC5600.49124099757011147No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4790.42018649613586323No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT4560.40001052659280506No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC4220.37018518031176256No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT3810.33421932156109374No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGTTT3790.3324648894269147No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3680.3228155126889304No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT3520.30878005561549865No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG3270.2868496539382615No Hit
GCTGCGTTCTTCATCGATGCCCGGCTTCCTTTTTCTCTTTATCGAAAAAA3050.26755090046229285No Hit
GCTGCGTTCTTCATCGATGTGGTAGATTCGACTTTGCCCAAGGAATTTTC2790.24474328271796628No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2400.21053185610147634No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG2140.18772423835714977No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTG2050.1798292937533444No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAAGCCGGACGATCGGGCAAACT2040.1789520776862549No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1860.16316218847864417No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT1770.1552672438748388No Hit
GCTGCGTTCTTCATCGATGCGACCGAACTCGATCTCTTCCAGCTCTTCCT1750.15351281174065984No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT1730.15175837960648086No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG1680.14737229927103346No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGTGCAAACT1670.14649508320394394No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTTCTGAAAGTTG1610.14123178680140705No Hit
GCTGCGTTCTTCATCGATGCCTCTTCCGAAGCCGGACGATCGGGCAAACT1530.13421405826469118No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAAGCCGGACGATCGGGCAAACT1510.1324596261305122No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1430.12544189759379631No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1390.1219330333254384No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGGGTTCGATGCGCGT1390.1219330333254384No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1390.1219330333254384No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1370.12017860119125942No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC1350.11842416905708045No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGACAAACT1290.11316087265454354No Hit
GCTGCGTTCTTCATCGATTGCCGAAAGCGTCTTTACAGCCCCTGTCGTAA1200.10526592805073817No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCTGACGATCGGGCAAACT1170.10263427984946973No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)