FastQCFastQC Report
Sun 21 May 2023
EGAF00007833094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62344
Sequences flagged as poor quality0
Sequence length237-238
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT3566657.2083921467984No Hit
GCTGCGTTCTTCATCGATGCAAGTGCACGTAAGCTGCGTTCTTCATCGAT30974.967599127422045No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT30144.834466829205698No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT29504.731810599255742No Hit
GCTGCGTTCTTCATCGATGAAGTGCACGTAAGCTGCGTTCTTCATCGATG20573.299435390735275No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG11181.7932760169382782No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG9611.5414474528422943No Hit
GCTGCGTTCTTCATCGATGAAGTGCACGTAAGCTGCGTTCTTCATCGGCT6881.1035544719620172No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT6541.0490183498011034No Hit
GCTGCGTTCTTCATCGATGCAAGTGCACGTAAGCTGCGTTCTTCATCGGC6521.0458103426151675No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT6060.9720261773386373No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT5910.9479661234441165No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT5750.9223020659566277No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG4590.7362376491723341No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA4570.7330296419863981No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGGGTTCGATGCGCGT4300.6897215449762607No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT3650.5854613114333376No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2950.47318105992557424No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG2840.45553702040292576No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2670.4282689593224689No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG2570.41222892339278844No Hit
GCTGCGTTCTTCATCGATGCAGTGCACGTAAGCTGCGTTCTTCATCGATG2360.3785448479404594No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT2190.3512767868600026No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1740.2790966251764404No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1690.27107660721160015No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1620.25984858206082384No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1570.2518285640959836No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGGGTTCGATGAGCGT1460.23418452457333502No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1270.20370845630694212No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCTAGGCCGGACGATCGGGCAAACT1080.1732323880405492No Hit
GCTGCGTTCTTCATCGATTCGAGAACCAAGAGATCCGTTGTTGAAAGTTT880.14115231618118826No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTGCGAT710.11388425510073144No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGATATCCGTTGTTGAAAGTTT700.11228025150776337No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC690.11067624791479534No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTTAAAGTTT690.11067624791479534No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT680.10907224432182727No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)