FastQCFastQC Report
Sun 21 May 2023
EGAF00007833105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110557
Sequences flagged as poor quality0
Sequence length247-250
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC4388339.69264723174471No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA2547323.04060348960265No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC70346.362328934395832No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA37663.4063876552366654No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG28952.618558752498711No Hit
GGAAGTAAAAGTCGTAACAAGAAATGATAATTTAAACAAAAATACAGCTA22832.06499814575287No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC19031.7212840435250596No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC14961.3531481498231681No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC14511.3124451640330328No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC12531.133352026556437No Hit
GGAAGTAAAAGTCGTAACAAGCCACAGAAGAAATGAACGATCGTAGGGAT9870.8927521549969699No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC9700.877375471476252No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC7120.6440116862794758No Hit
GGAAGTAAAAGTCGTAACAATGCGCTACATCATTGCCTTGGAACACCTGG4960.44863735448682585No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC4930.4459238221008167No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGAAACCTCTCCGGCA4560.4124569226733721No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGTGGCTGGAAC3390.30662915961902004No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC3200.28944345450762954No Hit
GGAAGTAAAAGTCGTAACAATGCGCTACATCATTGCCTTGGAACCCCTGG2980.26954421701023No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC2930.2650216630335483No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCTAGACGCAGCACGCGCAAGTCGT2750.24874046871749414No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT2700.24421791474081245No Hit
GGAAGTAAAAGTCGTAACAAGTCATCAAAGAATCTATCGAACGTTGGAAC2590.23426829599211266No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG2580.2333637851967763No Hit
GGAAGTAAAAGTCGTAACAAACAGGGAGTTGTGGTGGGAAGGAGCTTGCA2560.23155476360610366No Hit
GGAAGTAAAAGTCGTAACAAGGGTACGGGATGGGCTTACCCGCTCAGGCT2550.2306502528107673No Hit
GGAAGTAAAAGTCGTAACAAGGTCCTACGAGCCTGGCTGGAGGAGACCGA2500.22612769883408557No Hit
GGAAGTAAAAGTCGTAACAAGGACATTAAAAAGGGGAGCGCGCGGAAGTG2490.22522318803874924No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCTAGACGCAGCACGCGCAGTCGTA2480.22431867724341292No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCGTCGTTACC2430.2197961232667312No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC2410.2179871016760585No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCTGAAGGATC2360.21346454769937678No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA2350.21256003690404046No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG1940.1754750942952504No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCTAGACGCAGCACGCGCAGTCGTA1930.17457058349991408No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCTTAGACGCAGCACGCGCAGTCGTA1850.16733449713722334No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT1810.16371645395587797No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC1740.15738487838852358No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCTAGACGCAGCACGCGCATCGAAC1570.14200819486780575No Hit
GGAAGTAAAAGTCGTAACAAGGCAATGAAACAAGCATACAACAAAAAATG1530.13839015168646038No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA1500.13567661930045136No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACTGGAACGTGCGGCTGGATC1490.134772108505115No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTATCCGGCA1430.12934504373309696No Hit
GGAAGTAAAAGTCGTAACAAGAGATGGAGATTAGTCAATATTATCGAAAG1350.12210895737040622No Hit
GGAAGTAAAAGTCGTAACAAGGTTTGACGGATGTTTGGAGCTTCCGAAGA1340.12120444657506986No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG1290.11668189259838815No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG1240.11215933862170646No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT1190.10763678464502473No Hit
GGAAGTAAAAGTCGTAACAAGGGCATGTGAAAATCTGGTTTGGCTCTTGC1160.1049232522590157No Hit
GGAAGTAAAAGTCGTAACAAGTCCTTAATCGGCGGCAGCGCCGCAATGGA1140.10311423066834302No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTTCGGCTGGATC1130.1022097198730067No Hit
GGAAGTAAAAGTCGTAACAAGACTTAGAGTTGCTGATAACACAGGTGCAA1130.1022097198730067No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)