FastQCFastQC Report
Sun 21 May 2023
EGAF00007833114

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833114
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences215751
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT9925446.0039582667056No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG145126.726272415886833No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCATGTTTAATGGGTG117795.459534370640229No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA115265.3422695607436355No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG76793.5591955541341638No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG67193.1142381727083537No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG62402.892222979267767No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA52772.4458751060250012No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT28551.323284712469467No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT27511.2750809961483378No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT26591.2324392470950307No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT24451.1332508308188607No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT19560.9066006646550886No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT17900.8296601174502088No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT15490.7179572748214377No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT15450.7161032857321635No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT14350.6651185857771227No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG8450.3916551951091768No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACCGTGATGTCTTC8360.3874837196583098No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT8090.3749692933057089No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT8000.37079781785484195No Hit
GCTGCGTTCTTCATCGATGCGACGTTCTAAGGTTGTATCGCGCTCCTGAG7870.3647723533147007No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT7210.3341815333416763No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC6450.2989557406454663No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA6170.28597781702054687No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCTGACGATCGGGCAAACT6100.28273333611431695No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG5920.274390385212583No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT5410.25075202432433685No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT5400.2502885270520183No Hit
GCTGCGTTCTTCATCGATGCCTACCTCGAGCCCAACCTCGTTTTCGGCAA5350.24797104069042555No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG5230.24240907342260293No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT5030.23313912797623187No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4980.23082164161463908No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA4730.2192342098066753No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG4200.19466885437379203No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT4080.18910688710596937No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3860.17890994711496122No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG3790.17566546620873136No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTTG3690.17103049348554583No Hit
GCTGCGTTCTTCATCGATGCTAGTGCCAAGAGATCCATTGTCAAAAGTTG3690.17103049348554583No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC3520.16315103985613044No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGTACGATCGGGCAAACT3300.1529540998651223No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT2960.1371951926062915No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT2710.1256077607983277No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG2590.12004579353050507No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGAGATCCGTTGTTGAAAGTTG2470.11448382626268244No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT2340.10845836172254125No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC2220.10289639445471863No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAGGCCGGACGATCGGGCAAACT2180.10104240536544441No Hit
GCTGCGTTCTTCATCGATTCCGCTTCCGAGGCCGGACGATCGGGCAAACT2160.10011541082080731No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)