FastQCFastQC Report
Sun 21 May 2023
EGAF00007833124

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833124
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences120840
Sequences flagged as poor quality0
Sequence length235-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT4006933.1587222773916No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT2469520.436113869579607No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2231118.463257199602783No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGGGAGTCG75976.286825554452167No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG37043.06521019529957No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT14031.1610393909301555No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT12441.0294604435617345No Hit
GCTGCGTTCTTCATCGATGGGAGAACCTAGAGATCCGTTGTCGAAAGTTG9960.8242303872889772No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG9660.7994041708043693No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG7930.6562396557431315No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT7060.584243627937769No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA6640.5494869248593182No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG6160.5097649784839458No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA5980.49486924859318104No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT5960.4932141674942072No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT4450.3682555445216816No Hit
GCTGCGTTCTTCATCGGTGAACGCTGCACGTGGTGTTCTCGATAGAACGA4370.3616352201257862No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA3650.3020523005627276No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA3260.26977821913273753No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3100.2565375703409467No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG2980.2466070837471036No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGTGCAAACT2740.2267461105594174No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG2440.20191989407480967No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2420.20026481297583582No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG2340.1936444885799404No Hit
GCTGCGTTCTTCATCGATGAACGCTGCACGTGGTGTTCTCGATAGAACGA2300.1903343263819927No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATACGTTGCCGAGAGTCG2270.18785170473353194No Hit
GCTGCGTTCTTCATCGATGCTAGTTGGCGGGTGAATACTGTAATGTCTTC2010.1663356504468719No Hit
GCTGCGTTCTTCATCGATGCGATAAAGATTGGCATCATGTTTAATGGGTG1790.14812975835815956No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGGGTTCGATGCGCGT1710.14150943396226415No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1440.11916583912611718No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1420.11751075802714332No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCAGTTGCCGAGAGTCG1410.1166832174776564No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACATCGCGTGGGCAGATCATCC1370.1133730552797087No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1240.10261502813637868No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGACGAGAGTCG1220.10095994703740484No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)