FastQCFastQC Report
Sun 21 May 2023
EGAF00007833152

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833152
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92015
Sequences flagged as poor quality0
Sequence length236-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG3026032.88594250937347No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1060011.51986089224583No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT991210.772156713579308No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG49565.386078356789654No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT38574.191707873716242No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAGATTG37964.1254143346193555No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT35833.893930337444982No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC27312.967994348747487No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT15201.6519045807748736No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT14271.5508341031353583No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT14171.5399663098407868No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT13651.4834537847090148No Hit
GCTGCGTTCTTCATCGATGCAGAGCCTGACATCGCGCGGGCAGATCATAC6790.7379231647014073No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA6630.720534695430093No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT6530.7096669021355213No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGCCAAAAGTTG6040.6564147149921209No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC5640.6129435418138347No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG4610.5010052708797478No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG4530.49231103624409067No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTG3840.41732326251154706No Hit
GCTGCGTTCTTCATCGATGCGGTCGCGGTCGGCGCAGTCCACTACGAAGA3780.4108025865348041No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTGAAAGTTT3110.3379883714611748No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG3010.3271205781666033No Hit
GCTGCGTTCTTCATCGATGCCGGTAACGTCTGGCTCCTTCGTCCCGATAC2410.26191381839917405No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT2330.25321958376351683No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG2040.22170298320925938No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG2010.2184426452208879No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1930.20974841058523067No Hit
GCTGCGTTCTTCATCGATGCTCTCGGCAAAGGCGCTCGCCTCGGCCCGCA1740.18909960332554474No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCGTTGTTGAAAGTTT1710.1858392653371733No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1710.1858392653371733No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGCTACCTTGTTACGA1690.183665706678259No Hit
GCTGCGTTCTTCATCGATGCCGAGCCAGAAGTGATGGTTTTAGTGGGGAA1670.18149214801934468No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1630.17714503070151605No Hit
GCTGCGTTCTTCATCGATGCGCACACTACTCCCACCGCCCCCGAGTGCCT1540.16736401673640167No Hit
GCTGCGTTCTTCATCGATGCGAGGAGTGCATTCCACATGCCCAGGTGCCG1510.16410367874803022No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1480.16084334075965875No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA1430.15540944411237298No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTAAAAGTTT1390.15106232679454437No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1360.1478019888061729No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTTG1350.14671520947671574No Hit
GCTGCGTTCTTCATCGATGACAGAGCCAAGAGATCCGTTGTTGAAAGTTT1340.1456284301472586No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGCTGAAAGTTT1280.13910775417051569No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG1220.13258707819377274No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGTTT1190.1293267402054013No Hit
GCTGCGTTCTTCATCGATGAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT1150.12497962288757268No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1080.11737216758137262No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCAGTTGTTGAAAGTTT1020.11085149160462969No Hit
GCTGCGTTCTTCATCGATGCCGCCTCCAGACGGAATCTGGAACTCACAGA1000.10867793294571537No Hit
GCTGCGTTCTTCATCGATGAAGTCGAGAGAAATTTGTTCTTGTCCGAGGT960.10433081562788676No Hit
GCTGCGTTCTTCATCGATGCCGACGAATATGCGCAAAACCCCGGCCTGCA950.1032440362984296No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)