FastQCFastQC Report
Sun 21 May 2023
EGAF00007833184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89637
Sequences flagged as poor quality0
Sequence length235-238
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1901521.213338242020594No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1357715.146647031917624No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT75468.418398652342225No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT56546.307663130180617No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG42804.774813971908921No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT31833.5509889889219854No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG20932.3349732811227506No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG17351.9355846358088735No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA17201.9188504746923702No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT16371.8262547831810523No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT16001.7849771857603443No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT13171.4692593460289836No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT11291.259524526702143No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTT10151.1323449022167187No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT9351.0430960429287013No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCTACTTCGCAAATCAAAATAA9201.026361881812198No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTACGCTGCGTTCTTCATCGA8460.9438066869707822No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT7760.865713935093767No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA7750.8645983243526669No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTATGCTGCGTTCTTCATCGA7630.8512109954594643No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCG7360.8210895054497584No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTAGGCTGCGTTCTTCATCGA7190.8021241228510547No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA6100.6805225520711313No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT5010.5589209812912078No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG4710.5254526590582015No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC4460.49756239053069606No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA4200.4685565112620904No Hit
GCTGCGTTCTTCATCGATGAAACTGCCTTTAAAAATTATGACAATAAGAG3960.44178185347568527No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG3850.42951013532358284No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT3810.42504769235918205No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTAAGCTGCGTTCTTCATCGA3390.378192041232973No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3340.37261398752747193No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTAGGCTGCGTTCTTCATCGG3310.36926715530417126No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTATGCTGCGTTCTTCATCGG3220.35922665863426934No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGCCAAAAGTTG2930.32687394714236306No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2870.3201802826957618No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTTAAAGTTT2850.31794906121356137No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA2780.31013978602585984No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT2770.3090241752847596No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTACGCTGCGTTCTTCATCGG2630.2934056249093566No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2520.28113390675725425No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2490.2777870745339536No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC2460.274440242310653No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATATTGTAATGTCTTC2150.23985630933654628No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA2010.22423775896114329No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT1860.20750359784464006No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT1650.18407577228153552No Hit
GCTGCGTTCTTCATCGATGCCGAGCCAGAAGTGATGGTTTTAGTGGGGAA1640.18296016154043532No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT1610.17961332931713467No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGATTCG1600.17849771857603444No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG1500.1673416111650323No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTAAGCTGCGTTCTTCATCGG1470.16399477894173164No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1080.12048596003882325No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT1070.11937034929772304No Hit
GCTGCGTTCTTCATCGATGCGCATCCCGACCACCAACATACTGCGCTGGC1050.1171391278155226No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1020.11379229559222197No Hit
GCTGCGTTCTTCATCGATGCTGTCCAGGGACAGGGCACTCCAGGCAGAGG960.10709863114562067No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT960.10709863114562067No Hit
GCTGCGTTCTTCATCGATGCCTTGCAATGGGTCTTCATAGTGTCTATCCA960.10709863114562067No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT910.10152057744011958No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACTAATGTGT900.10040496669901937No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTAGGCTGCGTTCTTCATCCT900.10040496669901937No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)