FastQCFastQC Report
Sun 21 May 2023
EGAF00007833190

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833190
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96257
Sequences flagged as poor quality0
Sequence length236-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1923519.98296227806809No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1545616.057014035342885No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1167512.128988021650374No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG971710.09485024465753No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT89029.248158575480225No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT42324.396563366820075No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT40044.15969747654716No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG27862.894334957457639No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT21962.281392522102289No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG13211.3723677239057939No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT9450.9817467820522143No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG9150.9505802175426202No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA8160.8477305546609597No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT7150.742803120811993No Hit
GCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAAAGTTT6140.637875686963026No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTT5020.5215205127938747No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG4380.45503184184007395No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA4360.4529540708727677No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC3840.39893202572280456No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCG3700.3843876289516606No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCACTGTTGAAGGTTG3620.3760765450824356No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT3180.3303655838016975No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG3180.3303655838016975No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGGGTTCGATGCGCGT3100.3220544999324725No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2810.29192682090653144No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2750.28569350800461263No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT2680.2784213096190407No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2670.27738242413538755No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG2240.23271034833830267No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA2170.22543814995273073No Hit
GCTGCGTTCTTCATCGATGCCGAGCCAGAAGTGATGGTTTTAGTGGGGAA1930.20050489834505542No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG1930.20050489834505542No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1720.17868830318833953No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGTTT1690.17557164673738013No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1660.17245499028642072No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1530.15894947899892994No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1470.15271616609701114No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCGATG1400.14544396771143916No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTATGGGTTG1400.14544396771143916No Hit
GCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTGAAAGTTT1190.1236273725547233No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA1180.12258848707107015No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1100.11427740320184507No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGTTT980.10181077739800741No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)