FastQCFastQC Report
Sun 21 May 2023
EGAF00007833195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences166005
Sequences flagged as poor quality0
Sequence length247-250
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC9620657.95367609409355No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA2113812.73335140507816No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC108796.553417065751031No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG49792.999307249781633No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCCAGTGCTTG22361.3469473811029788No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC21791.3126110659317491No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC16781.010812927321466No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC13780.8300954790518358No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGAAACAGAATCCGAAAAGAGCACA12520.7541941507785911No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC11700.7047980482515587No Hit
GGAAGTAAAAGTCGTAACAAGGACAGTAAAGTCATCCCGACCCAACGCGA10040.6048010602090298No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAACACA8390.505406463660733No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA7920.4770940634318243No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT7410.44637209722598714No Hit
GGAAGTAAAAGTCGTAACAAGCCAAAACCTGTTACATCAGTCATCGCTTT6670.4017951266528117No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT6400.38553055630854494No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC5200.3132435770006927No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT5110.30782205355260384No Hit
GGAAGTAAAAGTCGTAACAAACAGGGAGTTGTGGTGGGAAGGAGCTTGCA4560.2746905213698383No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT3830.23071594229089484No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC3750.22589681033703804No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3640.21927050390048494No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAATGATC3560.2144513719466281No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC3550.213848980452396No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCAAGGTTGTCCCACAATCGGATTTC3140.18915092918887985No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAAGATC3060.18433179723502305No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA2720.1638504864311316No Hit
GGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGGAAGGATC2710.16324809493689948No Hit
GGAAGTAAAAGTCGTAACAATTCAAAAGCACTCCACTAATATTACCAGCA2700.1626457034426674No Hit
GGAAGTAAAAGTCGTAACAAGGTTTACGTAGGTGAACCTGCGGAAGGATC2670.16083852895997108No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC2660.16023613746573898No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG2550.15360983102918588No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCG2540.15300743953495377No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCTAGACGCAGCACGCGCATCGAAC2370.14276678413300803No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCAGAGCGTCATCGAGAACGGCGC2350.14156200114454384No Hit
GGAAGTAAAAGTCGTAACAAGGAACACAGATGTATTATGCAAAGAAAGGC2300.13855004367338333No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG2140.1289117797656697No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG2030.12228547332911659No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA1990.1198759073521882No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC1950.11746634137525978No Hit
GGAAGTAAAAGTCGTAACAAGGTTAGCTGCACTCAGGTAAGTATATACGG1900.11445438390409927No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC1750.10541851149061775No Hit
GGAAGTAAAAGTCGTAACAAGGGGAAGTAGACCTGGCCCTCTTCCAGGGC1720.10361133700792144No Hit
GGAAGTAAAAGTCGTAACAAGGAACAAAAAGAAAATGGTGGCAGGAATGA1710.10300894551368936No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)