FastQCFastQC Report
Sun 21 May 2023
EGAF00007833196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007833196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences166005
Sequences flagged as poor quality0
Sequence length235-238
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT5049330.416553718261497No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1978811.920122887864823No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG151819.144905273937532No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA137718.295533267070269No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT106856.436553115870004No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG102466.172103249902111No Hit
GCTGCGTTCTTCATCGATGCAGGCAAGCACTGGCTGCGTTCTTCATCGAT54343.2733953796572393No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG50573.046293786331737No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT12440.7493750188247341No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA11700.7047980482515587No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG11060.6662449926207041No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTGCGAT10980.6614258606668474No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT10250.617451281587904No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT10020.6035962772205656No Hit
GCTGCGTTCTTCATCGATGCGGTTGATGGTGGTGCCGCCGTAAATATGGC9960.599981928255173No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT9190.5535977831993012No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT7790.46926297400680705No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT7670.4620342760760218No Hit
GCTGCGTTCTTCATCGATGCAGGCAAGCACTGGCTGCGTTCTTCATCGGC7120.4289027438932562No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC6670.4017951266528117No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC6120.3686635944700461No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG5860.35300141562001147No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCT5570.3355320622872805No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCAGTTGTCGAAAGTTG5270.31746031746031744No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG4770.2873407427487124No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT4690.28252161079485555No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT4580.27589530435830245No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT4540.2734857383813741No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG4540.2734857383813741No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG4410.2656546489563567No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4050.2439685551640011No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA4040.243366163669769No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG3910.23553507424475167No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT3900.23493268275051957No Hit
GCTGCGTTCTTCATCGATGAGGCAAGCACTGGCTGCGTTCTTCATCGATG3870.23312550826782327No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATACGTTGTTGAAAGTTT3850.23192072527935906No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC3810.22951115930243066No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG3750.22589681033703804No Hit
GCTGCGTTCTTCATCGATGCACGGGAACCCGTCCTCGACAAATACAAAGA3040.18312701424655883No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT2980.17951266528116624No Hit
GCTGCGTTCTTCATCGATGCTGTGTGGGAATGTATTTAATTTCCTACCTG2680.1614409204542032No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTCCGTGTGCCCTT2630.15842896298304268No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT2620.15782657148881057No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACTCTCGGCACGCTCGGCGC2420.14577874160416857No Hit
GCTGCGTTCTTCATCGATGCGCGTGCTGCGTCTAAGGGTTCGATGCGCGT2330.14035721815607966No Hit
GCTGCGTTCTTCATCGATGCGGCGGCGGCACTCTTCGCGCGAGATCTCTT2330.14035721815607966No Hit
GCTGCGTTCTTCATCGATGCTCGAATTCTCGTGAGAGTTGCCGATATTGG2320.13975482666184752No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2300.13855004367338333No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT2280.13734526068491915No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT2160.1301165627541339No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT2140.1289117797656697No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1950.11746634137525978No Hit
GCTGCGTTCTTCATCGATGCAGCTGGAGGTATGTCCTGGTCTCCGCGGAG1810.10903286045601036No Hit
GCTGCGTTCTTCATCGATGCTGTCACACAAACCCAGTGACAGACCCAACG1770.10662329447908196No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)